RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 MYCBPAPQ8TBZ2 947 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 GPT2Q8TD30 523 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 TAF4BQ92750 862 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 ASIC4Q96FT7 647 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 KXD1Q9BQD3 176 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 ABCB6Q9NP58 842 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 GDE1Q9NZC3 331 aa15.04■□□□□ -0
HLA-DQB1-202ENST00000399079 BICDL2A1A5D9 508 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 TMEM221A6NGB7 291 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 M0R296 226 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 MICAL2O94851 1124 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 GABRR2P28476 465 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 TAF12Q16514 161 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 C4orf50Q6ZRC1 276 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 FILIP1Q7Z7B0 1213 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 SCN4BQ8IWT1 228 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 B3GALNT2Q8NCR0 500 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 FBXL13Q8NEE6 735 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 SLC35C1Q96A29 364 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 FUBP3Q96I24 572 aaKnown RBP eCLIP15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 CEP63Q96MT8 703 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 MED15Q96RN5 788 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 IMPG2Q9BZV3 1241 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 NUP62CLQ9H1M0 184 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 MAGEC2Q9UBF1 373 aaPredicted RBP15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 HMGXB4Q9UGU5 601 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 MAGED2Q9UNF1 606 aaPredicted RBP15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 DUSP12Q9UNI6 340 aa15.03■□□□□ -0
HLA-DQB1-202ENST00000399079 PRR33A8MZF0 331 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 CLDN5O00501 218 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 PDGFBP01127 241 aaPredicted RBP15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 P4HA1P13674 534 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 HMGA1P17096 107 aaKnown RBP15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 MAPRE1Q15691 268 aaKnown RBP15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 CCDC40Q4G0X9 1142 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 FAM78AQ5JUQ0 283 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 TANGO2Q6ICL3 276 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 GPIHBP1Q8IV16 184 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 NXPE3Q969Y0 559 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 SRRTQ9BXP5 876 aaKnown RBP15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 BCO2Q9BYV7 579 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 PLA2G2FQ9BZM2 168 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 ATXN3LQ9H3M9 355 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 SLITRK6Q9H5Y7 841 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 IL21Q9HBE4 155 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 TMEM30AQ9NV96 361 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 RAB20Q9NX57 234 aa15.02■□□□□ -0
HLA-DQB1-202ENST00000399079 STX10O60499 249 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CFHP08603 1231 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 NDST1P52848 882 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CACNA2D1P54289 1103 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 RPL10AP62906 217 aaKnown RBP15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CYP4F8P98187 520 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FOXR2Q6PJQ5 311 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 MTSS1LQ765P7 747 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FRMD5Q7Z6J6 570 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TMEM150AQ86TG1 271 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ACOT1Q86TX2 421 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 PBXIP1Q96AQ6 731 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ASB16Q96NS5 453 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 B3GNT5Q9BYG0 378 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ZNF518BQ9C0D4 1074 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 NIF3L1Q9GZT8 377 aa15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 METTL14Q9HCE5 456 aaKnown RBP15.02□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CD58P19256 250 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FCARP24071 287 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 GRIK1P39086 918 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 VIPR2P41587 438 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 MAGEA11P43364 429 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 GPC5P78333 572 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 DPCR1Q3MIW9 517 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 VSTM1Q6UX27 236 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CCDC150Q8NCX0 1101 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ZSCAN18Q8TBC5 510 aaPredicted RBP15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TATDN2Q93075 761 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TNIP3Q96KP6 325 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 TWNKQ96RR1 684 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ARID3AQ99856 593 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 RWDD2AQ9UIY3 292 aa15.01□□□□□ -0.01
HLA-DQB1-202ENST00000399079 SLC38A8A6NNN8 435 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 F8VP50 259 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CSH1P0DML2 217 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CSH2P0DML3 217 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 SRFP11831 508 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 FMO5P49326 533 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 GPR158Q5T848 1215 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 PAQR9Q6ZVX9 377 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 C12orf29Q8N999 325 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 SMARCD2Q92925 531 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 RAPGEFL1Q9UHV5 662 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 COQ4Q9Y3A0 265 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 NCANO14594 1321 aa15□□□□□ -0.01
HLA-DQB1-202ENST00000399079 GOLGA6L22H0YM25 854 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 ECI2O75521 394 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 F11P03951 625 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CCDC130P13994 396 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 CDC25CP30307 473 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 NLRP12P59046 1061 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 USP46P62068 366 aa14.99□□□□□ -0.01
HLA-DQB1-202ENST00000399079 INCA1Q0VD86 236 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms