RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 LIMS2Q7Z4I7 341 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 OSTM1Q86WC4 334 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 TMEM86AQ8N2M4 240 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 KBTBD7Q8WVZ9 684 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 PRRX2Q99811 253 aa27.16■■□□□ 1.94
U2AF1-203ENST00000398137 MRPL45Q9BRJ2 306 aaKnown RBP27.16■■□□□ 1.94
U2AF1-203ENST00000398137 INTS2Q9H0H0 1204 aaKnown RBP27.16■■□□□ 1.94
U2AF1-203ENST00000398137 NRG2O14511 850 aaPredicted RBP27.15■■□□□ 1.94
U2AF1-203ENST00000398137 VNN2O95498 520 aa27.15■■□□□ 1.94
U2AF1-203ENST00000398137 COPB1P53618 953 aaKnown RBP27.15■■□□□ 1.94
U2AF1-203ENST00000398137 TCEAL8Q8IYN2 117 aa27.15■■□□□ 1.94
U2AF1-203ENST00000398137 SIX5Q8N196 739 aa27.15■■□□□ 1.94
U2AF1-203ENST00000398137 RTP3Q9BQQ7 232 aa27.15■■□□□ 1.94
U2AF1-203ENST00000398137 SDCBP2Q9H190 292 aa27.15■■□□□ 1.94
U2AF1-203ENST00000398137 ZFP37Q9Y6Q3 630 aaPredicted RBP27.15■■□□□ 1.94
U2AF1-203ENST00000398137 PIEZO1Q92508 2521 aa27.15■■□□□ 1.94
U2AF1-203ENST00000398137 GOLGA6L19H0YKK7 550 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 SRFP11831 508 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 MRE11P49959 708 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 CLCN5P51795 746 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 TPM4P67936 248 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 PABPC1LQ4VXU2 614 aaKnown RBP27.14■■□□□ 1.94
U2AF1-203ENST00000398137 DPH6Q7L8W6 267 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 NPAS3Q8IXF0 933 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 RNF214Q8ND24 703 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 OR10T2Q8NGX3 314 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 LMO3Q8TAP4 145 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 TATDN2Q93075 761 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 WNT16Q9UBV4 365 aa27.14■■□□□ 1.94
U2AF1-203ENST00000398137 CACNA1HO95180 2353 aa27.14■■□□□ 1.93
U2AF1-203ENST00000398137 COL4A3Q01955 1670 aa27.14■■□□□ 1.93
U2AF1-203ENST00000398137 MYO15AQ9UKN7 3530 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 HCRTO43612 131 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 WARSP23381 471 aaKnown RBP27.13■■□□□ 1.93
U2AF1-203ENST00000398137 CDH8P55286 799 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 GBP6Q6ZN66 633 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 APTXQ7Z2E3 356 aaKnown RBP27.13■■□□□ 1.93
U2AF1-203ENST00000398137 THEM5Q8N1Q8 247 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 EHBP1Q8NDI1 1231 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 FLCNQ8NFG4 579 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 SPATA18Q8TC71 538 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 NT5C1BQ96P26 610 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 TMEM209Q96SK2 561 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 BCO2Q9BYV7 579 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 DDX43Q9NXZ2 648 aaKnown RBP27.13■■□□□ 1.93
U2AF1-203ENST00000398137 INSL5Q9Y5Q6 135 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 USP34Q70CQ2 3546 aa27.13■■□□□ 1.93
U2AF1-203ENST00000398137 GTPBP10A4D1E9 387 aaKnown RBP27.12■■□□□ 1.93
U2AF1-203ENST00000398137 OR6C75A6NL08 312 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 GABRDO14764 452 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 GALR2O43603 387 aaPredicted RBP27.12■■□□□ 1.93
U2AF1-203ENST00000398137 TACC1O75410 805 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 RHOP08100 348 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 OR4Q2P0C623 313 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 ACAT1P24752 427 aaKnown RBP27.12■■□□□ 1.93
U2AF1-203ENST00000398137 NUBP1P53384 320 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 EXOC3L4Q17RC7 722 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 TPGS2Q68CL5 300 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 RNF19BQ6ZMZ0 732 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 GPR152Q8TDT2 470 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 ING5Q8WYH8 240 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 ARID3AQ99856 593 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 SNX25Q9H3E2 840 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 MFSD1Q9H3U5 465 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 CYP4F11Q9HBI6 524 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 AVENQ9NQS1 362 aaPredicted RBP27.12■■□□□ 1.93
U2AF1-203ENST00000398137 FBXL21Q9UKT6 434 aa27.12■■□□□ 1.93
U2AF1-203ENST00000398137 LGALS16A8MUM7 142 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 CPB1P15086 417 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 AOC1P19801 751 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 LHX1P48742 406 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 PRSS36Q5K4E3 855 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 OR6B3Q8NGW1 331 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 CRISPLD1Q9H336 500 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 SLC2A4RGQ9NR83 387 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 FAM86C1Q9NVL1 165 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 AFF4Q9UHB7 1163 aaKnown RBP27.11■■□□□ 1.93
U2AF1-203ENST00000398137 NME7Q9Y5B8 376 aa27.11■■□□□ 1.93
U2AF1-203ENST00000398137 PRRG1O14668 218 aa27.1■■□□□ 1.93
U2AF1-203ENST00000398137 SLC9A1P19634 815 aa27.1■■□□□ 1.93
U2AF1-203ENST00000398137 CCR2P41597 374 aa27.1■■□□□ 1.93
U2AF1-203ENST00000398137 APBA1Q02410 837 aa27.1■■□□□ 1.93
U2AF1-203ENST00000398137 ADCY1Q08828 1119 aa27.1■■□□□ 1.93
U2AF1-203ENST00000398137 TRIM65Q6PJ69 517 aa27.1■■□□□ 1.93
U2AF1-203ENST00000398137 ARHGEF19Q8IW93 802 aa27.1■■□□□ 1.93
U2AF1-203ENST00000398137 OXCT2Q9BYC2 517 aaPredicted RBP27.1■■□□□ 1.93
U2AF1-203ENST00000398137 CYP3A43Q9HB55 503 aa27.1■■□□□ 1.93
U2AF1-203ENST00000398137 CA14Q9ULX7 337 aa27.1■■□□□ 1.93
U2AF1-203ENST00000398137 H0Y858 1186 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 CEBPBP17676 345 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 CD58P19256 250 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 LMO2P25791 158 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 PCSK1P29120 753 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 ELF1P32519 619 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 GNL1P36915 607 aaPredicted RBP27.09■■□□□ 1.93
U2AF1-203ENST00000398137 CUL2Q13617 745 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 FKBP15Q5T1M5 1219 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 PPM1KQ8N3J5 372 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 TCEAL4Q96EI5 215 aa27.09■■□□□ 1.93
U2AF1-203ENST00000398137 CEP72Q9P209 647 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms