RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 UPP2O95045 317 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 OAZ2O95190 189 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 ACAT1P24752 427 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 NOP2P46087 812 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 RPL34P49207 117 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 PDCLQ13371 301 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 OVOS1Q6IE37 1185 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 FUKQ8N0W3 1084 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 SLC35F5Q8WV83 523 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 BADQ92934 168 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 CPXM1Q96SM3 734 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 NUP85Q9BW27 656 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 CTTNBP2NLQ9P2B4 639 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 FAN1Q9Y2M0 1017 aa20.62■□□□□ 0.89
PDLIM2-205ENST00000397761 CCDC130P13994 396 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 TKTP29401 623 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 BCAT1P54687 386 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 NAP1L1P55209 391 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 PSMC1P62191 440 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 AMPD2Q01433 879 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 PLCB3Q01970 1234 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 PAPD7Q5XG87 772 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 FAM171BQ6P995 826 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 PAQR9Q6ZVX9 377 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 CMTR2Q8IYT2 770 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 MSANTD4Q8NCY6 345 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 UBA3Q8TBC4 463 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 MYCBPAPQ8TBZ2 947 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 SLC2A14Q8TDB8 520 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 SLC4A5Q9BY07 1137 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 ABCB6Q9NP58 842 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 CYLDQ9NQC7 956 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 HESX1Q9UBX0 185 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 STRIP2Q9ULQ0 834 aa20.61■□□□□ 0.89
PDLIM2-205ENST00000397761 BUB1BO60566 1050 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 TADA2AO75478 443 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 FGFR3P22607 806 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 BCAR1P56945 870 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 BST2Q10589 180 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 ELAVL2Q12926 359 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 MAMLD1Q13495 774 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 MRPL58Q14197 206 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 C2CD6Q53TS8 623 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 INTS6LQ5JSJ4 861 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 C11orf63Q6NUN7 778 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 C7orf61Q8IZ16 206 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 SYCE1Q8N0S2 351 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 ZNF564Q8TBZ8 553 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 C18orf8Q96DM3 657 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 L2HGDHQ9H9P8 463 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 SCINQ9Y6U3 715 aa20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 SF3B1O75533 1304 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDLIM2-205ENST00000397761 FGBP02675 491 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 YWHAHQ04917 246 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 PDE4CQ08493 712 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 CCDC142Q17RM4 750 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 MDH1BQ5I0G3 518 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 PPP1R15BQ5SWA1 713 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 MEI1Q5TIA1 1274 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 ZNF365Q70YC5 407 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 THEM5Q8N1Q8 247 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 C3orf20Q8ND61 904 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 OR10T2Q8NGX3 314 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 UBE2Q2Q8WVN8 375 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 HTATIP2Q9BUP3 242 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 TLR10Q9BXR5 811 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 DUSP16Q9BY84 665 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 B3GNT5Q9BYG0 378 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 GPR62Q9BZJ7 368 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 MRPL47Q9HD33 250 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 PARVAQ9NVD7 372 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 WDR35Q9P2L0 1181 aa20.59■□□□□ 0.89
PDLIM2-205ENST00000397761 MYBPHLA2RUH7 354 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 CARNS1A5YM72 827 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 ATP1A1P05023 1023 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 EPHB4P54760 987 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 ZNF268Q14587 947 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 TMEM240Q5SV17 173 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 PRPF38BQ5VTL8 546 aaKnown RBP20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 PMF1Q6P1K2 205 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 LLGL2Q6P1M3 1020 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 FUT10Q6P4F1 479 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 PSRC1Q6PGN9 363 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 OTOP2Q7RTS6 562 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 TMEM110Q86TL2 294 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 TMEM173Q86WV6 379 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 XYLT1Q86Y38 959 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 RNF168Q8IYW5 571 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 MCRS1Q96EZ8 462 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 MIS12Q9H081 205 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 PCDH10Q9P2E7 1040 aa20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 CHORDC1Q9UHD1 332 aaPredicted RBP20.58■□□□□ 0.89
PDLIM2-205ENST00000397761 ERBB2P04626 1255 aa20.57■□□□□ 0.88
PDLIM2-205ENST00000397761 PRLRP16471 622 aa20.57■□□□□ 0.88
PDLIM2-205ENST00000397761 ADORA2BP29275 332 aa20.57■□□□□ 0.88
PDLIM2-205ENST00000397761 PLA2G4AP47712 749 aa20.57■□□□□ 0.88
PDLIM2-205ENST00000397761 HTRA4P83105 476 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-205ENST00000397761 NT5DC3Q86UY8 548 aa20.57■□□□□ 0.88
PDLIM2-205ENST00000397761 BCL7CQ8WUZ0 217 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-205ENST00000397761 PCED1BQ96HM7 432 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms