RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ASAH2Q9NR71 780 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 CISHQ9NSE2 258 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 CUL9Q8IWT3 2517 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 DOCK8Q8NF50 2099 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 EEF1GP26641 437 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 GBP2P32456 591 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 MAGEA11P43364 429 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 DDR2Q16832 855 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 SLC5A9Q2M3M2 681 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 TCP11X2Q5H9J9 407 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 SDHAF4Q5VUM1 108 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 CDKAL1Q5VV42 579 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 PDZD4Q76G19 769 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 ITIH5Q86UX2 942 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 SCN4BQ8IWT1 228 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 EHBP1Q8NDI1 1231 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 ITFG1Q8TB96 612 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 GPR152Q8TDT2 470 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 GIPC2Q8TF65 315 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 PSMG2Q969U7 264 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 ACSF2Q96CM8 615 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 MYADMQ96S97 322 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 CRACR2AQ9BSW2 395 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 NT5C1AQ9BXI3 368 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 ZNF518BQ9C0D4 1074 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 NAT10Q9H0A0 1025 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 FANCLQ9NW38 375 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 MRPS23Q9Y3D9 190 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 ASB3Q9Y575 518 aa22.56■■□□□ 1.2
TSPAN4-206ENST00000397408 CLDN5O00501 218 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 MYL4P12829 197 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 TRIM21P19474 475 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 TBXAS1P24557 533 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 RPL10AP62906 217 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 CYP4A22Q5TCH4 519 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 VSTM1Q6UX27 236 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 DNAJB7Q7Z6W7 309 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 CRYBG2Q8N1P7 616 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 PPM1KQ8N3J5 372 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 TTC39CQ8N584 583 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 AOPEPQ8N6M6 819 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 STKLD1Q8NE28 680 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 WHAMMQ8TF30 809 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 FUCA2Q9BTY2 467 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 B3GNT5Q9BYG0 378 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 ELOVL4Q9GZR5 314 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 AVENQ9NQS1 362 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 FAM49BQ9NUQ9 324 aa22.55■■□□□ 1.2
TSPAN4-206ENST00000397408 BDP1A6H8Y1 2624 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 VWA3BQ502W6 1294 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 ZNF394Q53GI3 561 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 MIIPQ5JXC2 388 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 FAM35AQ86V20 835 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 TMC8Q8IU68 726 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 LEMD2Q8NC56 503 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 ING5Q8WYH8 240 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 TCEAL4Q96EI5 215 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 MED10Q9BTT4 135 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 NDST4Q9H3R1 872 aa22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 FAM124BQ9H5Z6 455 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 ZNF334Q9HCZ1 680 aaPredicted RBP22.54■■□□□ 1.2
TSPAN4-206ENST00000397408 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.54■■□□□ 1.25e-7■■■■■ 27.2
TSPAN4-206ENST00000397408 ATP8B3O60423 1300 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 CCDC130P13994 396 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 GRIK1P39086 918 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 CCR2P41597 374 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 EPHA5P54756 1037 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 YWHAEP62258 255 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 NFKBIBQ15653 356 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 TAF12Q16514 161 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 PRSS36Q5K4E3 855 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 GBP6Q6ZN66 633 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 ARHGEF19Q8IW93 802 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 C12orf29Q8N999 325 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 KAT5Q92993 513 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 LRRC3Q9BY71 257 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 DNAI2Q9GZS0 605 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 TAB2Q9NYJ8 693 aa22.53■■□□□ 1.2
TSPAN4-206ENST00000397408 GTPBP10A4D1E9 387 aaKnown RBP22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 PES1O00541 588 aaKnown RBP22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 NRG2O14511 850 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 ZNF197O14709 1029 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 CEBPBP17676 345 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 CACNA2D1P54289 1103 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 NCAPHQ15003 741 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 EXOC3L4Q17RC7 722 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 ZSCAN23Q3MJ62 389 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 TRIM65Q6PJ69 517 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 RRAGAQ7L523 313 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 NPAS3Q8IXF0 933 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 ZDHHC14Q8IZN3 488 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 PLCD3Q8N3E9 789 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 SLC2A14Q8TDB8 520 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 FGF13Q92913 245 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 BPIFA3Q9BQP9 254 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 CDH7Q9ULB5 785 aa22.52■■□□□ 1.2
TSPAN4-206ENST00000397408 F8VP50 259 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 TRIM66O15016 1216 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 CSH1P0DML2 217 aa22.51■■□□□ 1.19
TSPAN4-206ENST00000397408 CSH2P0DML3 217 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms