RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SCARA3Q6AZY7 606 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 IRF2BP2Q7Z5L9 587 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 CCDC105Q8IYK2 499 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 CCDC170Q8IYT3 715 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 TMEM130Q8N3G9 435 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 LRRC52Q8N7C0 313 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 URGCPQ8TCY9 931 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 SHC3Q92529 594 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 FAXDC2Q96IV6 333 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 ZNF560Q96MR9 790 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 ARID3AQ99856 593 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 VRTNQ9H8Y1 702 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 KCNK12Q9HB15 430 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 DUSP12Q9UNI6 340 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 MTCL1Q9Y4B5 1905 aaKnown RBP14.12□□□□□ -0.15
SEC13-209ENST00000397117 DDHD2O94830 711 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 IPO7O95373 1038 aaKnown RBP14.12□□□□□ -0.15
SEC13-209ENST00000397117 STAU1O95793 577 aaKnown RBP14.12□□□□□ -0.15
SEC13-209ENST00000397117 CNPP09543 421 aaKnown RBP14.12□□□□□ -0.15
SEC13-209ENST00000397117 PNPLA4P41247 253 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 RNASELQ05823 741 aaKnown RBP14.12□□□□□ -0.15
SEC13-209ENST00000397117 SCARA5Q6ZMJ2 495 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 CCDC149Q6ZUS6 474 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 VPS36Q86VN1 386 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 FAM71AQ8IYT1 594 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 DTWD2Q8NBA8 298 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 GSTCDQ8NEC7 633 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 RTP3Q9BQQ7 232 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 HAUS4Q9H6D7 363 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 ARHGAP20Q9P2F6 1191 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 PCDHB4Q9Y5E5 795 aa14.12□□□□□ -0.15
SEC13-209ENST00000397117 SSU72P8A0A1W2PR75 194 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 ANO9A1A5B4 782 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 AKR1B10O60218 316 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 POMCP01189 267 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 KLRC2P26717 231 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 EIF4A3P38919 411 aaKnown RBP14.11□□□□□ -0.15
SEC13-209ENST00000397117 PRKCIP41743 596 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 SOX4Q06945 474 aaPredicted RBP14.11□□□□□ -0.15
SEC13-209ENST00000397117 GRIK3Q13003 919 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 MTF1Q14872 753 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 HGSNATQ68CP4 663 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 RAD9BQ6WBX8 426 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 ERMP1Q7Z2K6 904 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 MMS19Q96T76 1030 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.11□□□□□ -0.15
SEC13-209ENST00000397117 EMILIN2Q9BXX0 1053 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 GOLGA2P5Q9HBQ8 144 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 MIOSQ9NXC5 875 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 STK39Q9UEW8 545 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 POLIQ9UNA4 740 aa14.11□□□□□ -0.15
SEC13-209ENST00000397117 EPN1Q9Y6I3 576 aaPredicted RBP14.11□□□□□ -0.15
SEC13-209ENST00000397117 PIRO00625 290 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 CYP26A1O43174 497 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 PLEKP08567 350 aaPredicted RBP14.1□□□□□ -0.15
SEC13-209ENST00000397117 LRPAP1P30533 357 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 ASPAP45381 313 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 ID4P47928 161 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 TAF6P49848 677 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 AFF1P51825 1210 aaKnown RBP14.1□□□□□ -0.15
SEC13-209ENST00000397117 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
SEC13-209ENST00000397117 ANGPT1Q15389 498 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 SV2CQ496J9 727 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 CMASQ8NFW8 434 aaPredicted RBP14.1□□□□□ -0.15
SEC13-209ENST00000397117 KIAA1524Q8TCG1 905 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 TMEM175Q9BSA9 504 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 IGSF9Q9P2J2 1179 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 KANSL3Q9P2N6 904 aa14.1□□□□□ -0.15
SEC13-209ENST00000397117 PPEF2O14830 753 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 INPPL1O15357 1258 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 CCP110O43303 1012 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 NDUFA10O95299 355 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 ALDH2P05091 517 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 CD58P19256 250 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 ANXA13P27216 316 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 RPL9P32969 192 aaKnown RBP14.09□□□□□ -0.15
SEC13-209ENST00000397117 PDE6CP51160 858 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 BPIFB4P59827 614 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 PTK2Q05397 1052 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 SPA17Q15506 151 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 SMYD5Q6GMV2 418 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 TMEM270Q6UE05 265 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 TOGARAM2Q6ZUX3 1019 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 SIX5Q8N196 739 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 DDX27Q96GQ7 796 aaKnown RBP14.09□□□□□ -0.15
SEC13-209ENST00000397117 BCO2Q9BYV7 579 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 RHOBTB2Q9BYZ6 727 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 CYP3A43Q9HB55 503 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 RRAGDQ9NQL2 400 aaPredicted RBP14.09□□□□□ -0.15
SEC13-209ENST00000397117 CISHQ9NSE2 258 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 FBXL21Q9UKT6 434 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 FAN1Q9Y2M0 1017 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 SNX9Q9Y5X1 595 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 TRIP11Q15643 1979 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 DCHS1Q96JQ0 3298 aa14.09□□□□□ -0.15
SEC13-209ENST00000397117 FANCMQ8IYD8 2048 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 CASTOR2A6NHX0 329 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 PODXLO00592 558 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 NRP1O14786 923 aa14.08□□□□□ -0.15
SEC13-209ENST00000397117 ZSCAN12O43309 604 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms