RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 FAM200BP0CF97 657 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 CCDC130P13994 396 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 ARHGAP25P42331 645 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 GNG11P61952 73 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 HTRA4P83105 476 aaPredicted RBP16.31■□□□□ 0.2
VAMP1-202ENST00000396308 USP41Q3LFD5 358 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 CTXN3Q4LDR2 81 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 VARS2Q5ST30 1063 aaKnown RBP16.31■□□□□ 0.2
VAMP1-202ENST00000396308 TMCO2Q7Z6W1 182 aaPredicted RBP16.31■□□□□ 0.2
VAMP1-202ENST00000396308 MCOLN2Q8IZK6 566 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 C12orf29Q8N999 325 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 ANKRD52Q8NB46 1076 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 TRIM58Q8NG06 486 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 MYCBPAPQ8TBZ2 947 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 SLC2A14Q8TDB8 520 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 IGSF21Q96ID5 467 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 RAD9AQ99638 391 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 HNRNPABQ99729 332 aaKnown RBP16.31■□□□□ 0.2
VAMP1-202ENST00000396308 TTPALQ9BTX7 342 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 LACRTQ9GZZ8 138 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 THAP2Q9H0W7 228 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 ST7Q9NRC1 585 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 WDR35Q9P2L0 1181 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 UVRAGQ9P2Y5 699 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 HCSTQ9UBK5 93 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 CNOT8Q9UFF9 292 aaKnown RBP16.31■□□□□ 0.2
VAMP1-202ENST00000396308 LCMT1Q9UIC8 334 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 MRPL42Q9Y6G3 142 aaKnown RBP16.31■□□□□ 0.2
VAMP1-202ENST00000396308 BRCA2P51587 3418 aa16.31■□□□□ 0.2
VAMP1-202ENST00000396308 PTPRDP23468 1912 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 OAZ2O95190 189 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 TNNT1P13805 278 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 FGFR3P22607 806 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 PBX3P40426 434 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 EPHB4P54760 987 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 PLCB3Q01970 1234 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 KRT17Q04695 432 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 PDCLQ13371 301 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 NFE2Q16621 373 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-202ENST00000396308 ZNF569Q5MCW4 686 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 MMS22LQ6ZRQ5 1243 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 NYAP1Q6ZVC0 841 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 MON1BQ7L1V2 547 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 SPATA2LQ8IUW3 424 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-202ENST00000396308 SYCE1Q8N0S2 351 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 SMARCD1Q96GM5 515 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 RNPC3Q96LT9 517 aaKnown RBP16.3■□□□□ 0.2
VAMP1-202ENST00000396308 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 AVENQ9NQS1 362 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-202ENST00000396308 KRT82Q9NSB4 513 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 TRIM10Q9UDY6 481 aa16.3■□□□□ 0.2
VAMP1-202ENST00000396308 MKI67P46013 3256 aaKnown RBP16.29■□□□□ 0.2
VAMP1-202ENST00000396308 PATJQ8NI35 1801 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 HCRTO43612 131 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 URODP06132 367 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 CFHP08603 1231 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 CPB1P15086 417 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 DESP17661 470 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 MMP8P22894 467 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 IGFBP6P24592 240 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-202ENST00000396308 ACADSBP45954 432 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 ETF1P62495 437 aaKnown RBP16.29■□□□□ 0.2
VAMP1-202ENST00000396308 CREMQ03060 361 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 TAP1Q03518 808 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 SMARCB1Q12824 385 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 DNAJC24Q6P3W2 148 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 FAM35AQ86V20 835 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 UBA3Q8TBC4 463 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 STK32AQ8WU08 396 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 MYLPFQ96A32 169 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 C18orf8Q96DM3 657 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 HERC2P3Q9BVR0 1158 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 GPR62Q9BZJ7 368 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 CYLDQ9NQC7 956 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 PARVAQ9NVD7 372 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 CXXC1Q9P0U4 656 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-202ENST00000396308 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 NME7Q9Y5B8 376 aa16.29■□□□□ 0.2
VAMP1-202ENST00000396308 FAM170AA1A519 330 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 XPO1O14980 1071 aaKnown RBP16.28■□□□□ 0.2
VAMP1-202ENST00000396308 BUB1O43683 1085 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 ATP2C2O75185 946 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 AP1G2O75843 785 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 MOCS3O95396 460 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 CYP1A2P05177 515 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 NPR3P17342 541 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 CASQ1P31415 396 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 GLUD2P49448 558 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 KIF18AQ8NI77 898 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 ZNF592Q92610 1267 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 PCED1BQ96HM7 432 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 NUP85Q9BW27 656 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 DUSP16Q9BY84 665 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 CRTAC1Q9NQ79 661 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 SSX2IPQ9Y2D8 614 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 PAXBP1Q9Y5B6 917 aa16.28■□□□□ 0.2
VAMP1-202ENST00000396308 GBF1Q92538 1859 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms