RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PRKAG3Q9UGI9 489 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 C2CD4DB7Z1M9 353 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 CCDC130P13994 396 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 EEF1GP26641 437 aaKnown RBP21.21■□□□□ 0.99
SNCA-203ENST00000394986 PLD1Q13393 1074 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 MAPRE1Q15691 268 aaKnown RBP21.21■□□□□ 0.99
SNCA-203ENST00000394986 SLC5A9Q2M3M2 681 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 VWA3BQ502W6 1294 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 RRAGAQ7L523 313 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 ELMOD1Q8N336 334 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 PPM1KQ8N3J5 372 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 C12orf29Q8N999 325 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 ITFG1Q8TB96 612 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 FAM200AQ8TCP9 573 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 FUBP3Q96I24 572 aaKnown RBP eCLIP21.21■□□□□ 0.99
SNCA-203ENST00000394986 TNIP3Q96KP6 325 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 ZNF512Q96ME7 567 aaPredicted RBP21.21■□□□□ 0.99
SNCA-203ENST00000394986 HSD3B7Q9H2F3 369 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 FAM49BQ9NUQ9 324 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 TMEM30AQ9NV96 361 aa21.21■□□□□ 0.99
SNCA-203ENST00000394986 PES1O00541 588 aaKnown RBP21.2■□□□□ 0.98
SNCA-203ENST00000394986 PTPN2P17706 415 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 SLC9A1P19634 815 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 FSHRP23945 695 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 SSTR3P32745 418 aaPredicted RBP21.2■□□□□ 0.98
SNCA-203ENST00000394986 CCR2P41597 374 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 CACNA2D1P54289 1103 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 KRT31Q15323 416 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 SCN4BQ8IWT1 228 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 DHX40Q8IX18 779 aaKnown RBP21.2■□□□□ 0.98
SNCA-203ENST00000394986 ING5Q8WYH8 240 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 TCEAL4Q96EI5 215 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 FAXDC2Q96IV6 333 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 MYADMQ96S97 322 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 NT5C1AQ9BXI3 368 aa21.2■□□□□ 0.98
SNCA-203ENST00000394986 COL25A1Q9BXS0 654 aaPredicted RBP21.2■□□□□ 0.98
SNCA-203ENST00000394986 NAT10Q9H0A0 1025 aaKnown RBP21.2■□□□□ 0.98
SNCA-203ENST00000394986 C19orf67A6NJJ6 358 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 LOC730098B7Z3J9 87 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 ZNF165P49910 485 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 MTMR3Q13615 1198 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 IQCEQ6IPM2 695 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 PHLDB3Q6NSJ2 640 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 GJB7Q6PEY0 223 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 GBP6Q6ZN66 633 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 PAQR9Q6ZVX9 377 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 FAM35AQ86V20 835 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 TMC8Q8IU68 726 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 CRYBG2Q8N1P7 616 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 UBR7Q8N806 425 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 PSMG2Q969U7 264 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 BPIFA3Q9BQP9 254 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 MED10Q9BTT4 135 aa21.19■□□□□ 0.98
SNCA-203ENST00000394986 ZNF334Q9HCZ1 680 aaPredicted RBP21.19■□□□□ 0.98
SNCA-203ENST00000394986 DENND4AQ7Z401 1863 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 MYL4P12829 197 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 TBXAS1P24557 533 aaPredicted RBP21.18■□□□□ 0.98
SNCA-203ENST00000394986 GBP2P32456 591 aaPredicted RBP21.18■□□□□ 0.98
SNCA-203ENST00000394986 MAGEA11P43364 429 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 VEPH1Q14D04 833 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 EXOC3L4Q17RC7 722 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 TRIM65Q6PJ69 517 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 DNAJB7Q7Z6W7 309 aaPredicted RBP21.18■□□□□ 0.98
SNCA-203ENST00000394986 FUKQ8N0W3 1084 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 GJD3Q8N144 294 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 TDRD5Q8NAT2 981 aaKnown RBP21.18■□□□□ 0.98
SNCA-203ENST00000394986 SLC2A14Q8TDB8 520 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 KREMEN1Q96MU8 473 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 LRRC3Q9BY71 257 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 VPS16Q9H269 839 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 ASAH2Q9NR71 780 aa21.18■□□□□ 0.98
SNCA-203ENST00000394986 TTC28Q96AY4 2481 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 ATP1A3P13637 1013 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 ZNF18P17022 549 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 GJA1P17302 382 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 CEBPBP17676 345 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 GRIK1P39086 918 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 RAD23BP54727 409 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 PRSS36Q5K4E3 855 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 PDZD4Q76G19 769 aaPredicted RBP21.17■□□□□ 0.98
SNCA-203ENST00000394986 SLC4A11Q8NBS3 891 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 MRPS23Q9Y3D9 190 aaKnown RBP21.17■□□□□ 0.98
SNCA-203ENST00000394986 NR2E1Q9Y466 385 aa21.17■□□□□ 0.98
SNCA-203ENST00000394986 F8VP50 259 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 ACO1P21399 889 aaKnown RBP21.16■□□□□ 0.98
SNCA-203ENST00000394986 PON1P27169 355 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 ADORA2BP29275 332 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 RPL10AP62906 217 aaKnown RBP21.16■□□□□ 0.98
SNCA-203ENST00000394986 CYP4A22Q5TCH4 519 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 POTEHQ6S545 545 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 VSTM1Q6UX27 236 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 OTOP3Q7RTS5 596 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 ITIH5Q86UX2 942 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 ST13P5Q8NFI4 369 aaPredicted RBP21.16■□□□□ 0.98
SNCA-203ENST00000394986 TMEM176AQ96HP8 235 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 SIX2Q9NPC8 291 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 UBE2TQ9NPD8 197 aaPredicted RBP21.16■□□□□ 0.98
SNCA-203ENST00000394986 KRT82Q9NSB4 513 aa21.16■□□□□ 0.98
SNCA-203ENST00000394986 MAGED2Q9UNF1 606 aaPredicted RBP21.16■□□□□ 0.98
SNCA-203ENST00000394986 USTQ9Y2C2 406 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms