RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PEX11AO75192 247 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 IFNB1P01574 187 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 PIGRP01833 764 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 CDC25CP30307 473 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 NCOA4Q13772 614 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 SEZ6Q53EL9 994 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 GADL1Q6ZQY3 521 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 PRRT2Q7Z6L0 340 aaPredicted RBP19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 FAM13CQ8NE31 585 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 ZNF75CPQ92670 426 aaPredicted RBP19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 TARS2Q9BW92 718 aaKnown RBP19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 PPCSQ9HAB8 311 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 ANKFY1Q9P2R3 1169 aa19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 FARP1Q9Y4F1 1045 aaPredicted RBP19.29■□□□□ 0.68
PCDHA1-202ENST00000394633 LRRD1A4D1F6 860 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 CBX6O95503 412 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 CALB1P05937 261 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 GNAZP19086 355 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 GLRA2P23416 452 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 RNASELQ05823 741 aaKnown RBP19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 LDLRAD1Q5T700 205 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 ZNF449Q6P9G9 518 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 SLC35B2Q8TB61 432 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 FAXDC2Q96IV6 333 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 TBC1D10AQ9BXI6 508 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 A0A0B4J269 797 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 ATP2A1O14983 1001 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 GM2AP17900 193 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 KRT4P19013 534 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 PSMC4P43686 418 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 GEMIN4P57678 1058 aaKnown RBP19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 PLCB3Q01970 1234 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 MAPK6Q16659 721 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 HIF1AQ16665 826 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 XKR3Q5GH77 459 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 PPP1R15BQ5SWA1 713 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 ANKRD22Q5VYY1 191 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 SLFN12LQ6IEE8 588 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 SNRNP48Q6IEG0 339 aaKnown RBP19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 DCUN1D2Q6PH85 259 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 LONP2Q86WA8 852 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 RNPEPL1Q9HAU8 725 aa19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 SSU72Q9NP77 194 aaKnown RBP19.28■□□□□ 0.68
PCDHA1-202ENST00000394633 CENPFP49454 3210 aa19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 ADGRA2Q96PE1 1338 aa19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 LRRIQ4A6NIV6 560 aa19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 K7ERI5 159 aa19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 LDHAP00338 332 aaKnown RBP19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 BRD2P25440 801 aaKnown RBP19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 SSTR1P30872 391 aa19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 MSS51Q4VC12 460 aa19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 C10orf88Q9H8K7 445 aa19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 DDX56Q9NY93 547 aaKnown RBP19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 FBXO40Q9UH90 709 aa19.27■□□□□ 0.68
PCDHA1-202ENST00000394633 C3orf70A6NLC5 250 aaPredicted RBP19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 ZWINTO95229 277 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 CST3P01034 146 aaPredicted RBP19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 ATP4AP20648 1035 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 EPHB2P29323 1055 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 TFDP1Q14186 410 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 FNBP1LQ5T0N5 605 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 NLRP9Q7RTR0 991 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 DEPTORQ8TB45 409 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 KCNN1Q92952 543 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 WDR83Q9BRX9 315 aaKnown RBP19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 PORCNQ9H237 461 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 CYP39A1Q9NYL5 469 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 SAE1Q9UBE0 346 aaPredicted RBP19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 NUMBLQ9Y6R0 609 aa19.27■□□□□ 0.67
PCDHA1-202ENST00000394633 C2CD2LO14523 706 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 NDC80O14777 642 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 PIAS1O75925 651 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 SUPT20HL2P0C7V6 817 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 CALB2P22676 271 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 ADRA1DP25100 572 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 GDF10P55107 478 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 PPIL2Q13356 520 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 PIGHQ14442 188 aaPredicted RBP19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 TAF1BQ53T94 588 aaPredicted RBP19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 ZNF276Q8N554 614 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 NPHS2Q9NP85 383 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 KCNH4Q9UQ05 1017 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 LCTP09848 1927 aa19.26■□□□□ 0.67
PCDHA1-202ENST00000394633 A0A0G2JMZ2 1700 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 LSM8O95777 96 aaKnown RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 HARSP12081 509 aaKnown RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 NAMPTP43490 491 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 CTCFP49711 727 aaPredicted RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 TAF11Q15544 211 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 PLEKHG4Q58EX7 1191 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 SLC45A4Q5BKX6 768 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 SPDYAQ5MJ70 313 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 CYP4A22Q5TCH4 519 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 WDTC1Q8N5D0 677 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 NIPA2Q8N8Q9 360 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 NSUN6Q8TEA1 469 aaKnown RBP19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 STK32AQ8WU08 396 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 MZB1Q8WU39 189 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 CPT1BQ92523 772 aa19.25■□□□□ 0.67
PCDHA1-202ENST00000394633 DHRS4Q9BTZ2 278 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms