RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 JAM2P57087 298 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 FAAP100Q0VG06 881 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 KIF5AQ12840 1032 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 KIAA0753Q2KHM9 967 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 ASTE1Q2TB18 679 aaPredicted RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 EPC2Q52LR7 807 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 ZNF484Q5JVG2 852 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 KRT39Q6A163 491 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 LRRC69Q6ZNQ3 347 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 TMEM130Q8N3G9 435 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 LMBR1Q8WVP7 490 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 USP6NLQ92738 828 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 CPB2Q96IY4 423 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 MFSD14AQ96MC6 490 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 HERPUD2Q9BSE4 406 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 GPR88Q9GZN0 384 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 TCF7L1Q9HCS4 588 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 ARHGEF4Q9NR80 690 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 SEPT11Q9NVA2 429 aaKnown RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 AIPL1Q9NZN9 384 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 TRIP11Q15643 1979 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 MAPK13O15264 365 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 CA12O43570 354 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 KRT86O43790 486 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 HOXC6P09630 235 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 STAT1P42224 750 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 FLT3LGP49771 235 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 EFNA5P52803 228 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 NAP1L1P55209 391 aaKnown RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 POU5F1Q01860 360 aaKnown RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 PRPF4BQ13523 1007 aaKnown RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 TFDP1Q14186 410 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 KIZQ2M2Z5 673 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 ZNF568Q3ZCX4 644 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 MARCH8Q5T0T0 291 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 CDCA2Q69YH5 1023 aaPredicted RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 SPOPLQ6IQ16 392 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 MTHFD1LQ6UB35 978 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 FBXL13Q8NEE6 735 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 OR5B17Q8NGF7 314 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 SYN2Q92777 582 aaPredicted RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 TSPAN18Q96SJ8 248 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 ACO2Q99798 780 aaKnown RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 JPH2Q9BR39 696 aaPredicted RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 STK33Q9BYT3 514 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 IFT122Q9HBG6 1241 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 ZCCHC17Q9NP64 241 aaKnown RBP6.28□□□□□ -1.4
CASC3-202ENST00000394114 HDAC6Q9UBN7 1215 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 GTF2A1LQ9UNN4 478 aa6.28□□□□□ -1.4
CASC3-202ENST00000394114 SSU72P8A0A1W2PR75 194 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 MYADML2A6NDP7 307 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 GAS2O43903 313 aaKnown RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 PIP5K1CO60331 668 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 N4BP1O75113 896 aaKnown RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 TOM1L1O75674 476 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 MOCS3O95396 460 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 PIGRP01833 764 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 C6orf222P0C671 652 aaPredicted RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 TM4SF4P48230 202 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 DNA2P51530 1060 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 PTENP60484 403 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 ZNF200P98182 395 aaPredicted RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 PRKCZQ05513 592 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 MBTD1Q05BQ5 628 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 GBX1Q14549 363 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 PCBP1Q15365 356 aaKnown RBP eCLIP6.27□□□□□ -1.41
CASC3-202ENST00000394114 SLC18A3Q16572 532 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 MINDY4Q4G0A6 757 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 RPS26P11Q5JNZ5 115 aaPredicted RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 GNASQ5JWF2 1037 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 ATF7IP2Q5U623 682 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 SLFN12LQ6IEE8 588 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 PALB2Q86YC2 1186 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TMEM192Q8IY95 271 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TRPV1Q8NER1 839 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 U2AF1L4Q8WU68 220 aaKnown RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 SLC20A1Q8WUM9 679 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TMEM174Q8WUU8 243 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 SOCS4Q8WXH5 440 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TRIB2Q92519 343 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 KAT2BQ92831 832 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TRMT2BQ96GJ1 504 aaKnown RBP6.27□□□□□ -1.41
CASC3-202ENST00000394114 KREMEN1Q96MU8 473 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 AP5M1Q9H0R1 490 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TMEM8AQ9HCN3 771 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 IP6K2Q9UHH9 426 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 CYP8B1Q9UNU6 501 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 STYXL1Q9Y6J8 313 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 CAPN6Q9Y6Q1 641 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 CTAGE9A4FU28 777 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 ACKR2O00590 384 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TRPA1O75762 1119 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TOMM70O94826 608 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 PGK1P00558 417 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 SMIM10L2AP0DMW4 78 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 SMIM10L2BP0DMW5 78 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 ELNP15502 786 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 FERP16591 822 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 TMOD1P28289 359 aa6.27□□□□□ -1.41
CASC3-202ENST00000394114 ABCD1P33897 745 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms