RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.72□□□□□ -0.69
LTN1-203ENST00000389195 UTP11Q9Y3A2 253 aaKnown RBP10.72□□□□□ -0.69
LTN1-203ENST00000389195 SHBGP04278 402 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 HSD17B3P37058 310 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 COILP38432 576 aaPredicted RBP10.72□□□□□ -0.69
LTN1-203ENST00000389195 SCNN1GP51170 649 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 POU5F1BQ06416 359 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 PPP1R7Q15435 360 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 ZBTB6Q15916 424 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 PTGISQ16647 500 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 MAP9Q49MG5 647 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 TTMPQ5BVD1 217 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 KIAA0319Q5VV43 1072 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 WSCD1Q658N2 575 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 ALKAL1Q6UXT8 129 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 FAM183BPQ6ZVS7 135 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 KBTBD7Q8WVZ9 684 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 GTF2IRD1Q9UHL9 959 aa10.72□□□□□ -0.69
LTN1-203ENST00000389195 BARX2Q9UMQ3 279 aaPredicted RBP10.72□□□□□ -0.69
LTN1-203ENST00000389195 MIF4GDA9UHW6 222 aaKnown RBP10.71□□□□□ -0.69
LTN1-203ENST00000389195 LRCH4O75427 683 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 KRT1P04264 644 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 YY1P25490 414 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 TKTP29401 623 aaKnown RBP10.71□□□□□ -0.69
LTN1-203ENST00000389195 SLCO1A2P46721 670 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 LMAN1P49257 510 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 NDUFV1P49821 464 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 SP3Q02447 781 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 C1QBPQ07021 282 aaKnown RBP10.71□□□□□ -0.69
LTN1-203ENST00000389195 MFSD14CQ5VZR4 134 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 OSTM1Q86WC4 334 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 SLC2A14Q8TDB8 520 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 PEBP4Q96S96 227 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 ERP44Q9BS26 406 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 NT5C1AQ9BXI3 368 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 OSBPL8Q9BZF1 889 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 DNPEPQ9ULA0 475 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 PLAAQ9Y263 795 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 C2CD2Q9Y426 696 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 GOLGA6L10A0A0M3HER8 536 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 KPNA7A9QM74 516 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 PHF2O75151 1096 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 ADAMTS4O75173 837 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 IGHA2P01877 340 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 ITGB1P05556 798 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 CTNNA2P26232 953 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 LILRA4P59901 499 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 PITX1P78337 314 aaPredicted RBP10.71□□□□□ -0.69
LTN1-203ENST00000389195 PLCB3Q01970 1234 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 KRT17Q04695 432 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 MYO1EQ12965 1108 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 PAK2Q13177 524 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 DEFB115Q30KQ5 88 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 HSP90B2PQ58FF3 399 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 FBXO47Q5MNV8 452 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 NPNTQ6UXI9 565 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 CAPN12Q6ZSI9 719 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 ZNF771Q7L3S4 317 aaPredicted RBP10.71□□□□□ -0.69
LTN1-203ENST00000389195 CCDC26Q8TAB7 109 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 SH3TC2Q8TF17 1288 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 TMEM121Q9BTD3 319 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 SEMA4AQ9H3S1 761 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 MRPL47Q9HD33 250 aaKnown RBP10.71□□□□□ -0.69
LTN1-203ENST00000389195 AVENQ9NQS1 362 aaPredicted RBP10.71□□□□□ -0.69
LTN1-203ENST00000389195 ITGA11Q9UKX5 1188 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 PADI3Q9ULW8 664 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 CEP83Q9Y592 693 aa10.71□□□□□ -0.69
LTN1-203ENST00000389195 PRUNE2Q8WUY3 3088 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 REV3LO60673 3130 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 F5H423 210 aaPredicted RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 GOLGA8MH3BSY2 632 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 TP73O15350 636 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 SEPT4O43236 478 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 BANF1O75531 89 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 IFNB1P01574 187 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 CHKAP35790 457 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 GNL1P36915 607 aaPredicted RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 NUMBP49757 651 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 CRYBB1P53674 252 aaPredicted RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 INHBEP58166 350 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 MRPS6P82932 125 aaKnown RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 GAD2Q05329 585 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 GLE1Q53GS7 698 aaKnown RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 PPP1R15BQ5SWA1 713 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 CEP85LQ5SZL2 805 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 ZDHHC24Q6UX98 284 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 RHOT1Q8IXI2 618 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 MSL3Q8N5Y2 521 aaKnown RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 CALR3Q96L12 384 aaKnown RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 KCNK16Q96T55 309 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 MTG1Q9BT17 334 aaPredicted RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 CALN1Q9BXU9 219 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 NGRNQ9NPE2 291 aaKnown RBP10.71□□□□□ -0.7
LTN1-203ENST00000389195 GRHL1Q9NZI5 618 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 CALCOCO1Q9P1Z2 691 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 HCSTQ9UBK5 93 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 ASIC3Q9UHC3 531 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 NOD1Q9Y239 953 aa10.71□□□□□ -0.7
LTN1-203ENST00000389195 TLDC2A0PJX2 215 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms