RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 LUC7L2Q9Y383 392 aaKnown RBP4.09□□□□□ -1.75
SMC6-202ENST00000381272 EPN1Q9Y6I3 576 aaPredicted RBP4.09□□□□□ -1.75
SMC6-202ENST00000381272 AHDC1Q5TGY3 1603 aaPredicted RBP4.09□□□□□ -1.75
SMC6-202ENST00000381272 FLT1P17948 1338 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 FRMPD2Q68DX3 1309 aaPredicted RBP4.09□□□□□ -1.76
SMC6-202ENST00000381272 SLC12A8A0AV02 714 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CTAGE15A4D2H0 777 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 LGALS16A8MUM7 142 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 PSMA7O14818 248 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 N4BP1O75113 896 aaKnown RBP4.09□□□□□ -1.76
SMC6-202ENST00000381272 HIP1RO75146 1068 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 RHOBTB3O94955 611 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 BAG3O95817 575 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 ATP1A1P05023 1023 aaKnown RBP4.09□□□□□ -1.76
SMC6-202ENST00000381272 OR52Z1P0C646 297 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CTAGE8P0CG41 777 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CSF2RBP32927 897 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 BTDP43251 543 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 MTIF2P46199 727 aaKnown RBP4.09□□□□□ -1.76
SMC6-202ENST00000381272 GNAQP50148 359 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 VSNL1P62760 191 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 ASIC1P78348 528 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 GPSM2P81274 684 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 STK4Q13043 487 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 STIM1Q13586 685 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 KCNB1Q14721 858 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 BRD3Q15059 726 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 WDR72Q3MJ13 1102 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 TMEM177Q53S58 311 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 BEND6Q5SZJ8 279 aaPredicted RBP4.09□□□□□ -1.76
SMC6-202ENST00000381272 CCDC122Q5T0U0 273 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 SLFN13Q68D06 897 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 TTI2Q6NXR4 508 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 WDR59Q6PJI9 974 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CXXC5Q7LFL8 322 aaKnown RBP4.09□□□□□ -1.76
SMC6-202ENST00000381272 CTAGE6Q86UF2 777 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CTAGE4Q8IX94 777 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 AMOTL1Q8IY63 956 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CSGALNACT2Q8N6G5 542 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 C2orf69Q8N8R5 385 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 NOA1Q8NC60 698 aaKnown RBP4.09□□□□□ -1.76
SMC6-202ENST00000381272 GIMAP8Q8ND71 665 aaPredicted RBP4.09□□□□□ -1.76
SMC6-202ENST00000381272 CHST13Q8NET6 341 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CCDC148Q8NFR7 591 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 WDR48Q8TAF3 677 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 WDR66Q8TBY9 1149 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 SH3TC2Q8TF17 1288 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 COA7Q96BR5 231 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CAPZA3Q96KX2 299 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 UIMC1Q96RL1 719 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 PIGSQ96S52 555 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 EYA3Q99504 573 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 TUBGCP2Q9BSJ2 902 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CCSER1Q9C0I3 900 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 THAP9Q9H5L6 903 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 PIF1Q9H611 641 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 PDE11AQ9HCR9 933 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 TCP11L1Q9NUJ3 509 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 BTBD7Q9P203 1132 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 CAPN11Q9UMQ6 739 aa4.09□□□□□ -1.76
SMC6-202ENST00000381272 COL24A1Q17RW2 1714 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 DDX60LQ5H9U9 1706 aaKnown RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 BTAF1O14981 1849 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 CCDC151A5D8V7 595 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 MAP2K7O14733 419 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 LDHCP07864 332 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 MMEP08473 750 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 PLEKP08567 350 aaPredicted RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 SRGNP10124 158 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 CCNE1P24864 410 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 EEF1GP26641 437 aaKnown RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 RFC4P35249 363 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 HNRNPH2P55795 449 aaKnown RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 GSTO1P78417 241 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 SQSTM1Q13501 440 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 GRAPQ13588 217 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 TUBB2AQ13885 445 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 USP10Q14694 798 aaKnown RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 NONOQ15233 471 aaKnown RBP eCLIP4.08□□□□□ -1.76
SMC6-202ENST00000381272 WHAMMP3Q1A5X7 153 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 ZNF568Q3ZCX4 644 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 GALNT17Q6IS24 598 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 ABHD17CQ6PCB6 329 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 GPR155Q7Z3F1 870 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 ZNF804AQ7Z570 1209 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 KIAA1328Q86T90 577 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 DDX53Q86TM3 631 aaKnown RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 CIR1Q86X95 450 aaPredicted RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 TEX11Q8IYF3 940 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 MSANTD4Q8NCY6 345 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 GRAPLQ8TC17 118 aaPredicted RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 TBCKQ8TEA7 893 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 P2RX5Q93086 422 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 JAKMIP2Q96AA8 810 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 RRP36Q96EU6 259 aaKnown RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 DHTKD1Q96HY7 919 aaPredicted RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 WNK4Q96J92 1243 aa4.08□□□□□ -1.76
SMC6-202ENST00000381272 CNOT6LQ96LI5 555 aaKnown RBP4.08□□□□□ -1.76
SMC6-202ENST00000381272 C8orf49Q96NF6 230 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms