RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PCED1BQ96HM7 432 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 TNIP3Q96KP6 325 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 CD320Q9NPF0 282 aa20.66■□□□□ 0.9
GTF3A-201ENST00000381140 PES1O00541 588 aaKnown RBP20.65■□□□□ 0.9
GTF3A-201ENST00000381140 POU2F2P09086 479 aa20.65■□□□□ 0.9
GTF3A-201ENST00000381140 BDNFP23560 247 aa20.65■□□□□ 0.9
GTF3A-201ENST00000381140 TAF12Q16514 161 aa20.65■□□□□ 0.9
GTF3A-201ENST00000381140 DDR2Q16832 855 aa20.65■□□□□ 0.9
GTF3A-201ENST00000381140 NT5C1BQ96P26 610 aa20.65■□□□□ 0.9
GTF3A-201ENST00000381140 CRACR2AQ9BSW2 395 aa20.65■□□□□ 0.9
GTF3A-201ENST00000381140 MED10Q9BTT4 135 aa20.65■□□□□ 0.9
GTF3A-201ENST00000381140 INTS2Q9H0H0 1204 aaKnown RBP20.65■□□□□ 0.9
GTF3A-201ENST00000381140 ABCB6Q9NP58 842 aa20.65■□□□□ 0.9
GTF3A-201ENST00000381140 HSFX1Q9UBD0 423 aa20.65■□□□□ 0.9
GTF3A-201ENST00000381140 MRPS23Q9Y3D9 190 aaKnown RBP20.65■□□□□ 0.9
GTF3A-201ENST00000381140 ZNF638Q14966 1978 aaKnown RBP20.65■□□□□ 0.9
GTF3A-201ENST00000381140 LOC730098B7Z3J9 87 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 CLDN5O00501 218 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 P4HA2O15460 535 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 MAN2A1Q16706 1144 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 ZNF394Q53GI3 561 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 PDZD4Q76G19 769 aaPredicted RBP20.64■□□□□ 0.89
GTF3A-201ENST00000381140 OTOP3Q7RTS5 596 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 UNC93AQ86WB7 457 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 ITFG1Q8TB96 612 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 ACSF2Q96CM8 615 aaPredicted RBP20.64■□□□□ 0.89
GTF3A-201ENST00000381140 TWNKQ96RR1 684 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 MYADMQ96S97 322 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 TUBGCP2Q9BSJ2 902 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 B3GNT5Q9BYG0 378 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 CBX8Q9HC52 389 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 ASAH2Q9NR71 780 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 FAM49BQ9NUQ9 324 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 FANCLQ9NW38 375 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 GCNT4Q9P109 453 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 DENND4CQ5VZ89 1909 aa20.64■□□□□ 0.89
GTF3A-201ENST00000381140 C19orf67A6NJJ6 358 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 PMM2O15305 246 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 TRIM21P19474 475 aaKnown RBP20.63■□□□□ 0.89
GTF3A-201ENST00000381140 GRIK1P39086 918 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 RPL10AP62906 217 aaKnown RBP20.63■□□□□ 0.89
GTF3A-201ENST00000381140 MYL5Q02045 173 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 INCA1Q0VD86 236 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 CUL2Q13617 745 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 SLC5A9Q2M3M2 681 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 CYP4A22Q5TCH4 519 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 DNAJB7Q7Z6W7 309 aaPredicted RBP20.63■□□□□ 0.89
GTF3A-201ENST00000381140 ITIH5Q86UX2 942 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 PPM1KQ8N3J5 372 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 AOPEPQ8N6M6 819 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 RNF214Q8ND24 703 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 EHBP1Q8NDI1 1231 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 FUBP3Q96I24 572 aaKnown RBP eCLIP20.63■□□□□ 0.89
GTF3A-201ENST00000381140 NT5C1AQ9BXI3 368 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 ZNF518BQ9C0D4 1074 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 ELOVL4Q9GZR5 314 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 CISHQ9NSE2 258 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 TAB2Q9NYJ8 693 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 OBSL1O75147 1896 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 TTC28Q96AY4 2481 aa20.63■□□□□ 0.89
GTF3A-201ENST00000381140 CILPO75339 1184 aa20.62■□□□□ 0.89
GTF3A-201ENST00000381140 CCDC130P13994 396 aa20.62■□□□□ 0.89
GTF3A-201ENST00000381140 GJA1P17302 382 aa20.62■□□□□ 0.89
GTF3A-201ENST00000381140 IQCB1Q15051 598 aa20.62■□□□□ 0.89
GTF3A-201ENST00000381140 CFAP221Q4G0U5 840 aa20.62■□□□□ 0.89
GTF3A-201ENST00000381140 TCP11X2Q5H9J9 407 aa20.62■□□□□ 0.89
GTF3A-201ENST00000381140 TCEAL4Q96EI5 215 aa20.62■□□□□ 0.89
GTF3A-201ENST00000381140 ZNF334Q9HCZ1 680 aaPredicted RBP20.62■□□□□ 0.89
GTF3A-201ENST00000381140 MAGED2Q9UNF1 606 aaPredicted RBP20.62■□□□□ 0.89
GTF3A-201ENST00000381140 ASB3Q9Y575 518 aa20.62■□□□□ 0.89
GTF3A-201ENST00000381140 ATP8B3O60423 1300 aa20.62■□□□□ 0.89
GTF3A-201ENST00000381140 CEBPBP17676 345 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 TBXAS1P24557 533 aaPredicted RBP20.61■□□□□ 0.89
GTF3A-201ENST00000381140 EEF1GP26641 437 aaKnown RBP20.61■□□□□ 0.89
GTF3A-201ENST00000381140 ANXA13P27216 316 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 MAGEA11P43364 429 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 VWA3BQ502W6 1294 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 GBP6Q6ZN66 633 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 RRAGAQ7L523 313 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 ARHGEF19Q8IW93 802 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 C12orf29Q8N999 325 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 ST13P5Q8NFI4 369 aaPredicted RBP20.61■□□□□ 0.89
GTF3A-201ENST00000381140 LMO3Q8TAP4 145 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 WHAMMQ8TF30 809 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 PSMG2Q969U7 264 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 FAXDC2Q96IV6 333 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 DNAI2Q9GZS0 605 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 LIMD1Q9UGP4 676 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 USTQ9Y2C2 406 aa20.61■□□□□ 0.89
GTF3A-201ENST00000381140 ADORA2BP29275 332 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 CCR2P41597 374 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 YWHAEP62258 255 aaKnown RBP20.6■□□□□ 0.89
GTF3A-201ENST00000381140 MTMR3Q13615 1198 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 CDKAL1Q5VV42 579 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 FAM35AQ86V20 835 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 RNF135Q8IUD6 432 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 CRYBG2Q8N1P7 616 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 TTC39CQ8N584 583 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 SLC2A14Q8TDB8 520 aa20.6■□□□□ 0.89
GTF3A-201ENST00000381140 FGF13Q92913 245 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms