RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 KPNB1Q14974 876 aaKnown RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 MROH9Q5TGP6 573 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 ARID3BQ8IVW6 561 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 KCTD17Q8N5Z5 321 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 EXD1Q8NHP7 514 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 GSDMBQ8TAX9 411 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 ZC3H7BQ9UGR2 993 aaKnown RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 MYH10P35580 1976 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 C2orf71A6NGG8 1288 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 UGCGQ16739 394 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 ZNF568Q3ZCX4 644 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 TFDP3Q5H9I0 405 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 SPATA24Q86W54 205 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 RASSF3Q86WH2 238 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 ZCCHC9Q8N567 271 aaKnown RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 UBA3Q8TBC4 463 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 PARD3BQ8TEW8 1205 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 TIPINQ9BVW5 301 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 MIS12Q9H081 205 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 TRIM49D1C9J1S8 452 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 TOMM70O94826 608 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 SERPINB3P29508 390 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 ARL1P40616 181 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 GARSP41250 739 aaKnown RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 RGS7P49802 495 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 PIGHQ14442 188 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 WDR75Q8IWA0 830 aaKnown RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 EMC1Q8N766 993 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 SCG3Q8WXD2 468 aaKnown RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 ZNF317Q96PQ6 595 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 A1CFQ9NQ94 594 aaKnown RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 ZMYM2Q9UBW7 1377 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 F8VP50 259 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 GCLCP48506 637 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 PTDSS1P48651 473 aaKnown RBP11.91□□□□□ -0.5
SMAD9-202ENST00000379826 BNIP1Q12981 228 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 NOGQ13253 232 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 BMPR2Q13873 1038 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 TBC1D10AQ9BXI6 508 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 AKT3Q9Y243 479 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 SLC4A7Q9Y6M7 1214 aa11.91□□□□□ -0.5
SMAD9-202ENST00000379826 ENTPD3O75355 529 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 DGAT1O75907 488 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 HSPA4LO95757 839 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 RANBP1P43487 201 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 HIC1Q14526 733 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 FASTKD3Q14CZ7 662 aaKnown RBP11.9□□□□□ -0.5
SMAD9-202ENST00000379826 MORF4L2Q15014 288 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 TTC39BQ5VTQ0 682 aaPredicted RBP11.9□□□□□ -0.5
SMAD9-202ENST00000379826 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 IL31RAQ8NI17 732 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 ABTB1Q969K4 478 aaPredicted RBP11.9□□□□□ -0.5
SMAD9-202ENST00000379826 CALB2P22676 271 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 CCNHP51946 323 aaPredicted RBP11.9□□□□□ -0.5
SMAD9-202ENST00000379826 SPP2Q13103 211 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 WLSQ5T9L3 541 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 MTMR12Q9C0I1 747 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 HESX1Q9UBX0 185 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 STARD13Q9Y3M8 1113 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 ADGRA3Q8IWK6 1321 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 IGKV6D-41A0A0C4DH26 115 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 ICAM1P05362 532 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 MAMLD1Q13495 774 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 WDR72Q3MJ13 1102 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 FAM182AQ5T1J6 154 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 NSUN6Q8TEA1 469 aaKnown RBP11.9□□□□□ -0.5
SMAD9-202ENST00000379826 WWP1Q9H0M0 922 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 ANLNQ9NQW6 1124 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 CYP26B1Q9NR63 512 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 TAC1P20366 129 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 SNRPFP62306 86 aaKnown RBP11.9□□□□□ -0.5
SMAD9-202ENST00000379826 SH2D4BQ5SQS7 431 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 KIAA1841Q6NSI8 718 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 VSTM1Q6UX27 236 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 ZBTB45Q96K62 511 aaPredicted RBP11.9□□□□□ -0.5
SMAD9-202ENST00000379826 BTBD10Q9BSF8 475 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 VCX3AQ9NNX9 186 aa11.9□□□□□ -0.5
SMAD9-202ENST00000379826 MROH7Q68CQ1 1323 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 HNRNPCL1O60812 293 aaKnown RBP11.89□□□□□ -0.51
SMAD9-202ENST00000379826 FKTNO75072 461 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 CAP2P40123 477 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 RASA2Q15283 850 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 LRRC23Q53EV4 343 aaPredicted RBP11.89□□□□□ -0.51
SMAD9-202ENST00000379826 RFWD2Q8NHY2 731 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 LRRN4Q8WUT4 740 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 MKL1Q969V6 931 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 CLMNQ96JQ2 1002 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 NACA2Q9H009 215 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 Q9H521 79 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 RNPEPL1Q9HAU8 725 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 FSCN2O14926 492 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 RPS12P25398 132 aaKnown RBP11.89□□□□□ -0.51
SMAD9-202ENST00000379826 BCAR1P56945 870 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 SPIRE1Q08AE8 756 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 ASPHQ12797 758 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 SNX30Q5VWJ9 437 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 ABRAQ8N0Z2 381 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 DNAAF3Q8N9W5 541 aa11.89□□□□□ -0.51
SMAD9-202ENST00000379826 E2F7Q96AV8 911 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms