RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PCDHA3Q9Y5H8 950 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 MYPNQ86TC9 1320 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 ATRNL1Q5VV63 1379 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 A6NNZ2 444 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 KCNK1O00180 336 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 KRT4P19013 534 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 MMP14P50281 582 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 ZNF157P51786 506 aaPredicted RBP12.24□□□□□ -0.45
DDR1-227ENST00000376570 EFNA5P52803 228 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 MXD4Q14582 209 aaPredicted RBP12.24□□□□□ -0.45
DDR1-227ENST00000376570 TUBB8Q3ZCM7 444 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 MCUQ8NE86 351 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 USP6NLQ92738 828 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 RBM41Q96IZ5 413 aaKnown RBP12.24□□□□□ -0.45
DDR1-227ENST00000376570 PGLYRP2Q96PD5 576 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 CPXM1Q96SM3 734 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 NAALADL1Q9UQQ1 740 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 AHDC1Q5TGY3 1603 aaPredicted RBP12.24□□□□□ -0.45
DDR1-227ENST00000376570 CFAP69A5D8W1 941 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 ENO4A6NNW6 628 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 M0QZ92 97 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 MED7O43513 233 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 BNIP3LO60238 219 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 FAM107AO95990 144 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 PGK1P00558 417 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 GZMAP12544 262 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 HSPA6P17066 643 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 SEPT6Q14141 434 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 ANKRD20A3Q5VUR7 823 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 LMO3Q8TAP4 145 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 EXT2Q93063 718 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 FAM167AQ96KS9 214 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 ZFP42Q96MM3 310 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 VPS11Q9H270 941 aa12.24□□□□□ -0.45
DDR1-227ENST00000376570 PRG3Q9Y2Y8 225 aaPredicted RBP12.24□□□□□ -0.45
DDR1-227ENST00000376570 C2orf71A6NGG8 1288 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 SUN1O94901 812 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 LGALS2P05162 132 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 YWHAEP62258 255 aaKnown RBP12.23□□□□□ -0.45
DDR1-227ENST00000376570 IL9RQ01113 521 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 PTPN11Q06124 597 aaPredicted RBP12.23□□□□□ -0.45
DDR1-227ENST00000376570 SNAPC2Q13487 334 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 PSMD6Q15008 389 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 CLUL1Q15846 466 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 PTPN20Q4JDL3 420 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 CYB5D1Q6P9G0 228 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 SPOCD1Q6ZMY3 1216 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 RNF135Q8IUD6 432 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 BORCS6Q96GS4 357 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 MROH7Q68CQ1 1323 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 MAFGO15525 162 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 BAG2O95816 211 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 POMCP01189 267 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 PDHA1P08559 390 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 ARF4P18085 180 aaPredicted RBP12.23□□□□□ -0.45
DDR1-227ENST00000376570 ATP5DP30049 168 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 MIPP30301 263 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 NOMO3P69849 1222 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 NFIL3Q16649 462 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 FKBP1CQ5VVH2 108 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 VPS52Q8N1B4 723 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 FBXO36Q8NEA4 188 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 FAM172AQ8WUF8 416 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 CYTH2Q99418 400 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 TRAIPQ9BWF2 469 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 NXF3Q9H4D5 531 aaKnown RBP12.23□□□□□ -0.45
DDR1-227ENST00000376570 TMPRSS4Q9NRS4 437 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 TNPO2O14787 897 aaKnown RBP12.23□□□□□ -0.45
DDR1-227ENST00000376570 ISLR2Q6UXK2 745 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 YIPF3Q9GZM5 350 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 ETNK1Q9HBU6 452 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 ABCF3Q9NUQ8 709 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 NINJ2Q9NZG7 142 aa12.23□□□□□ -0.45
DDR1-227ENST00000376570 HBP1O60381 514 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 HUS1O60921 280 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 FAM155BO75949 473 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 MICAL2O94851 1124 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 ACO1P21399 889 aaKnown RBP12.22□□□□□ -0.45
DDR1-227ENST00000376570 ELF1P32519 619 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 ROR1Q01973 937 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 DUPD1Q68J44 220 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 NXNQ6DKJ4 435 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 LBX2Q6XYB7 198 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 PID1Q7Z2X4 250 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 CYP4X1Q8N118 509 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 GPC2Q8N158 579 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 CLEC4CQ8WTT0 213 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 CELF6Q96J87 481 aaKnown RBP12.22□□□□□ -0.45
DDR1-227ENST00000376570 TMEM237Q96Q45 408 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 NACA2Q9H009 215 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 ATXN3LQ9H3M9 355 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
DDR1-227ENST00000376570 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.22□□□□□ -0.45
DDR1-227ENST00000376570 A0A1W2PPM1 405 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 SPTLC1O15269 473 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 DIAPH2O60879 1101 aa12.22□□□□□ -0.45
DDR1-227ENST00000376570 RFX1P22670 979 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms