RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 NR1H3Q13133 447 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 DDX43Q9NXZ2 648 aaKnown RBP18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 RCCD1A6NED2 376 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 OTUD4Q01804 1114 aaKnown RBP18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 TSNAXIP1Q2TAA8 658 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 NUDCD3Q8IVD9 361 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 EDEM1Q92611 657 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 TRIM17Q9Y577 477 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 STX1BP61266 288 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 E2F5Q15329 346 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 TRIM68Q6AZZ1 485 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 TAF2Q6P1X5 1199 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 SYDE1Q6ZW31 735 aaPredicted RBP18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 ZNF710Q8N1W2 664 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 CDC26Q8NHZ8 85 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 KRT82Q9NSB4 513 aa18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 BARX2Q9UMQ3 279 aaPredicted RBP18.77■□□□□ 0.6
PTPDC1-202ENST00000375360 ADAMTSL3P82987 1691 aa18.77■□□□□ 0.59
PTPDC1-202ENST00000375360 COL1A1P02452 1464 aaPredicted RBP18.77■□□□□ 0.59
PTPDC1-202ENST00000375360 HABP4Q5JVS0 413 aaKnown RBP18.77■□□□□ 0.59
PTPDC1-202ENST00000375360 IPMKQ8NFU5 416 aa18.77■□□□□ 0.59
PTPDC1-202ENST00000375360 EPS8L1Q8TE68 723 aa18.77■□□□□ 0.59
PTPDC1-202ENST00000375360 MOSPD1Q9UJG1 213 aa18.77■□□□□ 0.59
PTPDC1-202ENST00000375360 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 DCDC2CA8MYV0 355 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 BTBD19C9JJ37 291 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 ALDH1A1P00352 501 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 NNMTP40261 264 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 BCAT1P54687 386 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 PGLYRP2Q96PD5 576 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 CYP3A43Q9HB55 503 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 USP18Q9UMW8 372 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 PRLRP16471 622 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 COPS2P61201 443 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 ACTL9Q8TC94 416 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 WNK4Q96J92 1243 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 MAGEB5Q9BZ81 275 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 BCAS3Q9H6U6 928 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 PYGMP11217 842 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 OCRLQ01968 901 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 PAK5Q9P286 719 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 MYPNQ86TC9 1320 aa18.76■□□□□ 0.59
PTPDC1-202ENST00000375360 KLRG2A4D1S0 409 aaPredicted RBP18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 MAPK13O15264 365 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 NFICP08651 508 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 PDK1Q15118 436 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 TFDP3Q5H9I0 405 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 RGMBQ6NW40 437 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 RASSF3Q86WH2 238 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 SLC25A41Q8N5S1 370 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 HIPK4Q8NE63 616 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 CNPY3Q9BT09 278 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 ZNF518BQ9C0D4 1074 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 ATP11BQ9Y2G3 1177 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 ABCC6O95255 1503 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 MAFO75444 373 aaPredicted RBP18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 FARP2O94887 1054 aaPredicted RBP18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 DNAJB2P25686 324 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 HSD17B3P37058 310 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 FASTKD1Q53R41 847 aaKnown RBP18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 TRMT10CQ7L0Y3 403 aaKnown RBP18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 NLRP14Q86W24 1093 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 EFHBQ8N7U6 833 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 ADAM32Q8TC27 787 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 SOCS4Q8WXH5 440 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 MID2Q9UJV3 735 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 TCHHQ07283 1943 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 IGLV3-22A0A075B6J6 115 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 PMPCBO75439 489 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 PPP1R37O75864 691 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 CTCFP49711 727 aaPredicted RBP18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 TAS2R42Q7RTR8 314 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 TTC30AQ86WT1 665 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 CLEC4DQ8WXI8 215 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 CDT1Q9H211 546 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 GTSE1Q9NYZ3 720 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 TKTL1P51854 596 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 CTXN3Q4LDR2 81 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 SHCBP1Q8NEM2 672 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 BAP1Q92560 729 aa18.75■□□□□ 0.59
PTPDC1-202ENST00000375360 ATICP31939 592 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 SEC24CP53992 1094 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 MUM1Q2TAK8 710 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 ABHD15Q6UXT9 468 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 SLC2A14Q8TDB8 520 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 KRT35Q92764 455 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 TCP11X1B4DZS4 312 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 NFIL3Q16649 462 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 ELMSAN1Q6PJG2 1045 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 MTMR14Q8NCE2 650 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 CHMP6Q96FZ7 201 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 RPRD1AQ96P16 312 aaPredicted RBP18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 ADAM2Q99965 735 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 RNPEPQ9H4A4 650 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 SMYD3Q9H7B4 428 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 ITGA11Q9UKX5 1188 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 MAP2K5Q13163 448 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 HYIQ5T013 277 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 NDUFAF2Q8N183 169 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms