RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 TMCO5BA8MYB1 307 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 KRT86O43790 486 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 TLL1O43897 1013 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 SOD2P04179 222 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 MYBL1P10243 752 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 GSCP56915 257 aaPredicted RBP18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 PDCLQ13371 301 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 MAPRE1Q15691 268 aaKnown RBP18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 CCDC142Q17RM4 750 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 USP41Q3LFD5 358 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 ARHGAP29Q52LW3 1261 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 RTP2Q5QGT7 225 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 NYAP1Q6ZVC0 841 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 ANKS3Q6ZW76 656 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 DDX53Q86TM3 631 aaKnown RBP18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 MCOLN2Q8IZK6 566 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 SLC2A14Q8TDB8 520 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 STK32AQ8WU08 396 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 PIK3R5Q8WYR1 880 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 MYLPFQ96A32 169 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 TMEM169Q96HH4 297 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 RNPC3Q96LT9 517 aaKnown RBP18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 LPIN3Q9BQK8 851 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 AVENQ9NQS1 362 aaPredicted RBP18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 HESX1Q9UBX0 185 aa18.24■□□□□ 0.51
HLA-DMA-201ENST00000374843 H7C4K7 107 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 CYP1A2P05177 515 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 SSTR3P32745 418 aaPredicted RBP18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 RPL34P49207 117 aaKnown RBP18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 BST2Q10589 180 aaKnown RBP18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 PAQR9Q6ZVX9 377 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 FAM35AQ86V20 835 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 CPA5Q8WXQ8 436 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 CTNNBL1Q8WYA6 563 aaPredicted RBP18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 RFFLQ8WZ73 363 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 SECISBP2LQ93073 1101 aaKnown RBP18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 PCED1BQ96HM7 432 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 NOX5Q96PH1 765 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 GDF15Q99988 308 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 B3GNT5Q9BYG0 378 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 CYLDQ9NQC7 956 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 MTRRQ9UBK8 725 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 TRIM10Q9UDY6 481 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 CYTH4Q9UIA0 394 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 TFR2Q9UP52 801 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 RWDD3Q9Y3V2 267 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 PCDHB12Q9Y5F1 795 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 BACE2Q9Y5Z0 518 aa18.23■□□□□ 0.51
HLA-DMA-201ENST00000374843 NLRC5Q86WI3 1866 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 LCHNA4D1U4 455 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 MTA2O94776 668 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 CALB1P05937 261 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 DSG1Q02413 1049 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 PTPN20Q4JDL3 420 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 CTXN3Q4LDR2 81 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 TAS1R1Q7RTX1 841 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 DNAAF5Q86Y56 855 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 DCP1BQ8IZD4 617 aaKnown RBP18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 RNF10Q8N5U6 811 aaKnown RBP18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 MSANTD4Q8NCY6 345 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 SLC35F5Q8WV83 523 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 ARHGEF26Q96DR7 871 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 TMEM209Q96SK2 561 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 DUSP16Q9BY84 665 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 THAP2Q9H0W7 228 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 LZTFL1Q9NQ48 299 aa18.22■□□□□ 0.51
HLA-DMA-201ENST00000374843 PTPRDP23468 1912 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 XPO1O14980 1071 aaKnown RBP18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 ABL1P00519 1130 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 FAM200BP0CF97 657 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 NPR3P17342 541 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 ADORA2BP29275 332 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 PLA2G4AP47712 749 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 GABRB2P47870 512 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 HADHBP55084 474 aaKnown RBP18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 GPC5P78333 572 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 SHHQ15465 462 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 NFE2Q16621 373 aaPredicted RBP18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 MMS22LQ6ZRQ5 1243 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 LRRTM3Q86VH5 581 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 ZNF653Q96CK0 615 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 SMARCD1Q96GM5 515 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 FUBP3Q96I24 572 aaKnown RBP eCLIP18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 CALR3Q96L12 384 aaKnown RBP18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 B3GALT6Q96L58 329 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 C11orf70Q9BRQ4 267 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 PLVAPQ9BX97 442 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 SLC4A5Q9BY07 1137 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 KRT82Q9NSB4 513 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 TMLHEQ9NVH6 421 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 ADAM22Q9P0K1 906 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 MYO1AQ9UBC5 1043 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 SALL4Q9UJQ4 1053 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 STRIP2Q9ULQ0 834 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 PATJQ8NI35 1801 aa18.21■□□□□ 0.51
HLA-DMA-201ENST00000374843 TCRBV5S1A1TA0A578 114 aa18.2■□□□□ 0.5
HLA-DMA-201ENST00000374843 LINC01553A4QN01 128 aa18.2■□□□□ 0.5
HLA-DMA-201ENST00000374843 FGF18O76093 207 aa18.2■□□□□ 0.5
HLA-DMA-201ENST00000374843 ABCB4P21439 1286 aa18.2■□□□□ 0.5
HLA-DMA-201ENST00000374843 GLUD2P49448 558 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms