RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 CCDC186Q7Z3E2 898 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 LRRC8AQ8IWT6 810 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 EFHBQ8N7U6 833 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 MCRS1Q96EZ8 462 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 SMARCD1Q96GM5 515 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 CEP350Q5VT06 3117 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 KIAA1549LQ6ZVL6 1849 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ARHGEF15O94989 841 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 GUCY2FP51841 1108 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 BST2Q10589 180 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ACAP1Q15027 740 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 SGO2Q562F6 1265 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 NOP9Q86U38 636 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 FUKQ8N0W3 1084 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ZNF606Q8WXB4 792 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 TIFAQ96CG3 184 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 EEF2KMTQ96G04 330 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 TWNKQ96RR1 684 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 SNX25Q9H3E2 840 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 PUF60Q9UHX1 559 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 CXorf51AA0A1B0GTR3 108 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ZNF487B1APH4 448 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ARHGAP6O43182 974 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 OR1G1P47890 313 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ZNF268Q14587 947 aaPredicted RBP11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 MSANTD2Q6P1R3 559 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 DSTYKQ6XUX3 929 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 TMEM169Q96HH4 297 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 NCAPGQ9BPX3 1015 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 DDX43Q9NXZ2 648 aaKnown RBP11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 RRN3Q9NYV6 651 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 SNX9Q9Y5X1 595 aa11.85□□□□□ -0.51
CSGALNACT2-201ENST00000374466 CLASP2O75122 1294 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 RTN2O75298 545 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 OLFM2O95897 454 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 MMP8P22894 467 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 DDX6P26196 483 aaKnown RBP eCLIP11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 LMBRD2Q68DH5 695 aaPredicted RBP11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ACAD10Q6JQN1 1059 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 WDTC1Q8N5D0 677 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 RNF214Q8ND24 703 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 APOL6Q9BWW8 343 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 MRPL17Q9NRX2 175 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ZNF638Q14966 1978 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 MTMR11A4FU01 709 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 LRRN2O75325 713 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 TUBB4AP04350 444 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 DNAJB1P25685 340 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 PSMD5Q16401 504 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 SPOPLQ6IQ16 392 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 SCML2Q9UQR0 700 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 TNRC18O15417 2968 aaPredicted RBP11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 IGLV3-25P01717 112 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 TUFMP49411 452 aaKnown RBP11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 PSEN1P49768 467 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 PDE6CP51160 858 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 TSPY1Q01534 308 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 PLEKHA7Q6IQ23 1121 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ELMSAN1Q6PJG2 1045 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 ZNF571Q7Z3V5 609 aaPredicted RBP11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 SLC2A13Q96QE2 648 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 PI4K2AQ9BTU6 479 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 MMRN2Q9H8L6 949 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 PCDHB5Q9Y5E4 795 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 NOTCH4Q99466 2003 aa11.84□□□□□ -0.51
CSGALNACT2-201ENST00000374466 SART1O43290 800 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 URODP06132 367 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 TMEM253P0C7T8 217 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 DNAJB2P25686 324 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 KRT9P35527 623 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 FAM35AQ86V20 835 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 TFAP2BQ92481 460 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 KAT5Q92993 513 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 AZIN2Q96A70 460 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 PRDM16Q9HAZ2 1276 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 STRIP2Q9ULQ0 834 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 COL4A3Q01955 1670 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 DDX3XO00571 662 aaKnown RBP eCLIP11.83□□□□□ -0.523e-10■■□□□ 12.2
CSGALNACT2-201ENST00000374466 RTN3O95197 1032 aaPredicted RBP11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 LATS1O95835 1130 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 ARHGAP25P42331 645 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 BRCC3P46736 316 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 RPL10AP62906 217 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 TAS1R1Q7RTX1 841 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 TMC6Q7Z403 805 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 CDK5RAP1Q96SZ6 601 aaKnown RBP11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 ARID3AQ99856 593 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 TRPV4Q9HBA0 871 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 CNGB3Q9NQW8 809 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 ADH1AP07327 375 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 NPR3P17342 541 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 GNA15P30679 374 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 RSPO2Q6UXX9 243 aaPredicted RBP11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 ARHGAP18Q8N392 663 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 PPM1KQ8N3J5 372 aa11.83□□□□□ -0.52
CSGALNACT2-201ENST00000374466 PDZD8Q8NEN9 1154 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms