RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ACSF2Q96CM8 615 aaPredicted RBP14.91□□□□□ -0.02
TRAF1-201ENST00000373887 TMEM169Q96HH4 297 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 HPDLQ96IR7 371 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 NSMCE4AQ9NXX6 385 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 APEX2Q9UBZ4 518 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 TUBE1Q9UJT0 475 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 RSPH10B2B2RC85 870 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 RSPH10BP0C881 870 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 RALBP11234 206 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 FMO5P49326 533 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 SOX10P56693 466 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 STAT4Q14765 748 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 ZC3H13Q5T200 1668 aaKnown RBP14.91□□□□□ -0.02
TRAF1-201ENST00000373887 DCP1BQ8IZD4 617 aaKnown RBP14.91□□□□□ -0.02
TRAF1-201ENST00000373887 SCN3BQ9NY72 215 aa14.91□□□□□ -0.02
TRAF1-201ENST00000373887 C3orf70A6NLC5 250 aaPredicted RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 DHX34Q14147 1143 aaKnown RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 CCDC60Q8IWA6 550 aaPredicted RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 RFX3P48380 749 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 STK4Q13043 487 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 HEATR4Q86WZ0 1026 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 SHCBP1Q8NEM2 672 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 LIMA1Q9UHB6 759 aaKnown RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 PAIP2BQ9ULR5 123 aaKnown RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 ITSN1Q15811 1721 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 DDHD2O94830 711 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 GTF2H1P32780 548 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 CPA2P48052 419 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 PLIN5Q00G26 463 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 TRADDQ15628 312 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 BBS7Q8IWZ6 715 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 CCDC33Q8N5R6 958 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 VMP1Q96GC9 406 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 WNK4Q96J92 1243 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 KLF6Q99612 283 aaPredicted RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 RUSC1Q9BVN2 902 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 NT5C1AQ9BXI3 368 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 MRPS26Q9BYN8 205 aaKnown RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 SOX13Q9UN79 622 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 PDS5AQ29RF7 1337 aaKnown RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 MZF1P28698 734 aaPredicted RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 WEE1P30291 646 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 FMR1Q06787 632 aaKnown RBP eCLIP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 SDE2Q6IQ49 451 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 TRIM72Q6ZMU5 477 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 OR2W6PQ8NHA6 318 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 RTFDC1Q9BY42 306 aaPredicted RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 PRMT7Q9NVM4 692 aaPredicted RBP14.9□□□□□ -0.02
TRAF1-201ENST00000373887 BLOC1S6Q9UL45 172 aa14.9□□□□□ -0.02
TRAF1-201ENST00000373887 RTN2O75298 545 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 B3GAT3O94766 335 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 PRPF39Q86UA1 669 aaKnown RBP14.89□□□□□ -0.03
TRAF1-201ENST00000373887 MICU2Q8IYU8 434 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 MIER2Q8N344 545 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 RFFLQ8WZ73 363 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 GFM2Q969S9 779 aaKnown RBP14.89□□□□□ -0.03
TRAF1-201ENST00000373887 TRIM62Q9BVG3 475 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 TIPINQ9BVW5 301 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 IL25Q9H293 177 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 RANBP17Q9H2T7 1088 aaKnown RBP14.89□□□□□ -0.03
TRAF1-201ENST00000373887 RAB6BQ9NRW1 208 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 ZC3H7BQ9UGR2 993 aaKnown RBP14.89□□□□□ -0.03
TRAF1-201ENST00000373887 ATP6V1B1P15313 513 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 MDH1P40925 334 aaKnown RBP14.89□□□□□ -0.03
TRAF1-201ENST00000373887 RAP1GAPP47736 663 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 MTF1Q14872 753 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 CCDC134Q9H6E4 229 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 METTL5Q9NRN9 209 aaKnown RBP14.89□□□□□ -0.03
TRAF1-201ENST00000373887 FAM47DPA6NHR8 397 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 SERPINB4P48594 390 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 TRIM71Q2Q1W2 868 aaKnown RBP14.89□□□□□ -0.03
TRAF1-201ENST00000373887 DNAL1Q4LDG9 190 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 CHSY1Q86X52 802 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 DPF2Q92785 391 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 NDEL1Q9GZM8 345 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 SETD4Q9NVD3 440 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 ZBTB39O15060 712 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 RGS5O15539 181 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 IL18RAPO95256 599 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 VN1R5Q7Z5H4 357 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 P3H2Q8IVL5 708 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 MED15Q96RN5 788 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 EPN3Q9H201 632 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 CHMP2BQ9UQN3 213 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 KDM4FA0A1W2PPD8 638 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 ENDOD1O94919 500 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 MLNP12872 115 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 TRIM25Q14258 630 aaKnown RBP14.89□□□□□ -0.03
TRAF1-201ENST00000373887 KCNB1Q14721 858 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 ARHGAP15Q53QZ3 475 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 GPAT2Q6NUI2 795 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 SLC30A10Q6XR72 485 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 PPP1R14AQ96A00 147 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 SHCBP1LQ9BZQ2 653 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 PSD3Q9NYI0 1048 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 ADGRG1Q9Y653 693 aa14.89□□□□□ -0.03
TRAF1-201ENST00000373887 CASTOR2A6NHX0 329 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 GPR182O15218 404 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 EXTL3O43909 919 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms