RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 PDGFBP01127 241 aaPredicted RBP22.69■■□□□ 1.22
TMEM54-202ENST00000373463 PTPN1P18031 435 aaKnown RBP22.69■■□□□ 1.22
TMEM54-202ENST00000373463 NOP14P78316 857 aaKnown RBP22.69■■□□□ 1.22
TMEM54-202ENST00000373463 MDH1BQ5I0G3 518 aa22.69■■□□□ 1.22
TMEM54-202ENST00000373463 KRT39Q6A163 491 aa22.69■■□□□ 1.22
TMEM54-202ENST00000373463 TMEM150AQ86TG1 271 aa22.69■■□□□ 1.22
TMEM54-202ENST00000373463 SPATA2LQ8IUW3 424 aaPredicted RBP22.69■■□□□ 1.22
TMEM54-202ENST00000373463 GPT2Q8TD30 523 aa22.69■■□□□ 1.22
TMEM54-202ENST00000373463 NXPE3Q969Y0 559 aa22.69■■□□□ 1.22
TMEM54-202ENST00000373463 FUBP3Q96I24 572 aaKnown RBP eCLIP22.69■■□□□ 1.22
TMEM54-202ENST00000373463 KXD1Q9BQD3 176 aa22.69■■□□□ 1.22
TMEM54-202ENST00000373463 PLA2G2FQ9BZM2 168 aa22.69■■□□□ 1.22
TMEM54-202ENST00000373463 A8MXQ7 604 aa22.68■■□□□ 1.22
TMEM54-202ENST00000373463 MXI1P50539 228 aa22.68■■□□□ 1.22
TMEM54-202ENST00000373463 CACNA2D1P54289 1103 aa22.68■■□□□ 1.22
TMEM54-202ENST00000373463 PAK1Q13153 545 aa22.68■■□□□ 1.22
TMEM54-202ENST00000373463 DCAF17Q5H9S7 520 aaPredicted RBP22.68■■□□□ 1.22
TMEM54-202ENST00000373463 FAM78AQ5JUQ0 283 aa22.68■■□□□ 1.22
TMEM54-202ENST00000373463 FILIP1Q7Z7B0 1213 aa22.68■■□□□ 1.22
TMEM54-202ENST00000373463 FAM200AQ8TCP9 573 aa22.68■■□□□ 1.22
TMEM54-202ENST00000373463 CEP63Q96MT8 703 aa22.68■■□□□ 1.22
TMEM54-202ENST00000373463 ARMCX3Q9UH62 379 aaPredicted RBP22.68■■□□□ 1.22
TMEM54-202ENST00000373463 BDNFP23560 247 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 GABRR2P28476 465 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 MAGEA11P43364 429 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 ORC1Q13415 861 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 TANGO2Q6ICL3 276 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 BMP8AQ7Z5Y6 402 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 ITIH5Q86UX2 942 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 B3GALNT2Q8NCR0 500 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 ASB16Q96NS5 453 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 B3GNT5Q9BYG0 378 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 COQ4Q9Y3A0 265 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 COL4A3Q01955 1670 aa22.67■■□□□ 1.22
TMEM54-202ENST00000373463 CLDN5O00501 218 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 CYP27A1Q02318 531 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 VEPH1Q14D04 833 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 TCERG1LQ5VWI1 586 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 C4orf50Q6ZRC1 276 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 PAQR9Q6ZVX9 377 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 MTSS1LQ765P7 747 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 FRMD5Q7Z6J6 570 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 SCN4BQ8IWT1 228 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 FBXL13Q8NEE6 735 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 RSPRY1Q96DX4 576 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 GBP4Q96PP9 640 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 TWNKQ96RR1 684 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 ZNF518BQ9C0D4 1074 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 NIF3L1Q9GZT8 377 aa22.66■■□□□ 1.22
TMEM54-202ENST00000373463 MAGEC2Q9UBF1 373 aaPredicted RBP22.66■■□□□ 1.22
TMEM54-202ENST00000373463 NUP210Q8TEM1 1887 aaPredicted RBP22.66■■□□□ 1.22
TMEM54-202ENST00000373463 KMT2EQ8IZD2 1858 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 BICDL2A1A5D9 508 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 SLC38A8A6NNN8 435 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 TADA3O75528 432 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 NOL4O94818 638 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 CLSTN1O94985 981 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 F11P03951 625 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 SRFP11831 508 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 NDST1P52848 882 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 RPL10AP62906 217 aaKnown RBP22.65■■□□□ 1.22
TMEM54-202ENST00000373463 CYP4F8P98187 520 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 INCA1Q0VD86 236 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 MAPRE1Q15691 268 aaKnown RBP22.65■■□□□ 1.22
TMEM54-202ENST00000373463 IER5LQ5T953 404 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 ACOT1Q86TX2 421 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 WHAMMQ8TF30 809 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 NUP62CLQ9H1M0 184 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 RAB20Q9NX57 234 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 RAPGEFL1Q9UHV5 662 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 ZNF318Q5VUA4 2279 aa22.65■■□□□ 1.22
TMEM54-202ENST00000373463 ECI2O75521 394 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 P4HA1P13674 534 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 NLRP12P59046 1061 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 VSTM1Q6UX27 236 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 CRYBG2Q8N1P7 616 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 ZSCAN18Q8TBC5 510 aaPredicted RBP22.64■■□□□ 1.21
TMEM54-202ENST00000373463 SMARCD2Q92925 531 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 TATDN2Q93075 761 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 ARID3AQ99856 593 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 ATXN3LQ9H3M9 355 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 TRPV4Q9HBA0 871 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 METTL14Q9HCE5 456 aaKnown RBP22.64■■□□□ 1.21
TMEM54-202ENST00000373463 COL4A2P08572 1712 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 ANAPC1Q9H1A4 1944 aa22.64■■□□□ 1.21
TMEM54-202ENST00000373463 ZNF638Q14966 1978 aaKnown RBP22.63■■□□□ 1.21
TMEM54-202ENST00000373463 STX10O60499 249 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 CFHP08603 1231 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 CSH1P0DML2 217 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 CSH2P0DML3 217 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 VIPR2P41587 438 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 MARSP56192 900 aaKnown RBP22.63■■□□□ 1.21
TMEM54-202ENST00000373463 USP46P62068 366 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 GPC5P78333 572 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 DPCR1Q3MIW9 517 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 TRIM59Q8IWR1 403 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 FUKQ8N0W3 1084 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 PBXIP1Q96AQ6 731 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 ELSPBP1Q96BH3 223 aa22.63■■□□□ 1.21
TMEM54-202ENST00000373463 TRMT2BQ96GJ1 504 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms