RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PDK4Q16654 411 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MAPK6Q16659 721 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 BBS9Q3SYG4 887 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SPATA31D4Q6ZUB0 917 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 DEFB132Q7Z7B7 95 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 LRRC6Q86X45 466 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 RHPN2Q8IUC4 686 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 RFWD2Q8NHY2 731 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 PYROXD1Q8WU10 500 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 OLFM3Q96PB7 478 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 RIT2Q99578 217 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ARPC5LQ9BPX5 153 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ARMCX1Q9P291 453 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ANKFY1Q9P2R3 1169 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 HEY2Q9UBP5 337 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 IVNS1ABPQ9Y6Y0 642 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 A0A0J9YVX5 310 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 TRIM43BA6NCK2 446 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SIGLEC16A6NMB1 481 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 F8VP50 259 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 POLRMTO00411 1230 aaKnown RBP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ECE2O60344 883 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 UNGP13051 313 aaPredicted RBP8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 GCAP28676 217 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SERPINB3P29508 390 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MAMLD1Q13495 774 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 DGKZQ13574 1117 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MOGSQ13724 837 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ALCAMQ13740 583 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 PLEKHG4Q58EX7 1191 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 KCNT1Q5JUK3 1230 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 C3orf62Q6ZUJ4 267 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 CENPUQ71F23 418 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 CDAN1Q8IWY9 1227 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 KCTD17Q8N5Z5 321 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 TCP10LQ8TDR4 215 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SH3TC2Q8TF17 1288 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 STMN2Q93045 179 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 PPP2R3CQ969Q6 453 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 MCEEQ96PE7 176 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 CCDC28BQ9BUN5 200 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 NACA2Q9H009 215 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 GINM1Q9NU53 330 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLC17A7Q9P2U7 560 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 ITGB1BP2Q9UKP3 347 aa8.64□□□□□ -1.03
CDC42SE1-201ENST00000357235 CAPN9O14815 690 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 KRT36O76013 467 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 CYP1A1P04798 512 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 IDO1P14902 403 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 HOXD12P35452 270 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 ADARP55265 1226 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 CYP24A1Q07973 514 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 KLF1Q13351 362 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 TCEAL1Q15170 157 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 HIF1AQ16665 826 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 GSTA3Q16772 222 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 TKFCQ3LXA3 575 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 CFAP157Q5JU67 520 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 TXNRD3NBQ6F5E7 133 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 PODNQ7Z5L7 613 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 CLNKQ7Z7G1 428 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 SPATA24Q86W54 205 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 PALM2Q8IXS6 379 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMEM161BQ8NDZ6 487 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 C10orf82Q8WW14 230 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 BSNDQ8WZ55 320 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 PRR11Q96HE9 360 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 NR1H4Q96RI1 486 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 MRPL47Q9HD33 250 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 UTP6Q9NYH9 597 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMOD2Q9NZR1 351 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 PSMC3IPQ9P2W1 217 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 HSFX1Q9UBD0 423 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 SMG5Q9UPR3 1016 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 CTDP1Q9Y5B0 961 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 IKBKGQ9Y6K9 419 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 MYPNQ86TC9 1320 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 DNALI1O14645 258 aaPredicted RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 LIASO43766 372 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 HAUS5O94927 633 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 APBA3O96018 575 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 HLA-DRAP01903 254 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 LYNP07948 512 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 LIG4P49917 911 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 NRLP54845 237 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 BASP1P80723 227 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 HPCAP84074 193 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 AOC3Q16853 763 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 SCUBE1Q8IWY4 988 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLC15A3Q8IY34 581 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 LRRC43Q8N309 656 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 PDCD7Q8N8D1 485 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 DHRS1Q96LJ7 313 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 SIKE1Q9BRV8 207 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 IDI2Q9BXS1 227 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 RAVER2Q9HCJ3 691 aaKnown RBP8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZNF711Q9Y462 761 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 ACTL7BQ9Y614 415 aa8.63□□□□□ -1.03
CDC42SE1-201ENST00000357235 NUMBLQ9Y6R0 609 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms