RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 MROH7-TTC4A0A0A0MT08 1334 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SORBS3O60504 671 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SRP72O76094 671 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SERPINE1P05121 402 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 ADARP55265 1226 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 KCTD2Q14681 263 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TSNQ15631 228 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CEP78Q5JTW2 689 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 MROH9Q5TGP6 573 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 PLEKHA8Q96JA3 519 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CEP170P1Q96L14 293 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 AGPAT1Q99943 283 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 MAD2L2Q9UI95 211 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 DOCK9Q9BZ29 2069 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 COILP38432 576 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TFAMQ00059 246 aaKnown RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 NCAPHQ15003 741 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TUBA3EQ6PEY2 450 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TMC3Q7Z5M5 1100 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 EXOC3L1Q86VI1 746 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SLC13A5Q86YT5 568 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 SPATA18Q8TC71 538 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 THTPAQ9BU02 230 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 KBTBD4Q9NVX7 518 aa6.83□□□□□ -1.32
VPS13B-202ENST00000357162 CRNNQ9UBG3 495 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-202ENST00000357162 TTC23Q5W5X9 447 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SCYL2Q6P3W7 929 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 CCNYQ8ND76 341 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 TBCCD1Q9NVR7 557 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 FBXO2Q9UK22 296 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 GSTT1P30711 240 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 TJAP1Q5JTD0 557 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 STRA8Q7Z7C7 330 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PIK3R5Q8WYR1 880 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PCYOX1Q9UHG3 505 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PNMA3Q9UL41 463 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SRGAP2O75044 1071 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 FRG1Q14331 258 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 RRM2BQ7LG56 351 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SKA2Q8WVK7 121 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SRPK1Q96SB4 655 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 BAIAP3O94812 1187 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 VCAM1P19320 739 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 ATP4AP20648 1035 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 DLGAP5Q15398 846 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 MAPRE1Q15691 268 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 ZCCHC9Q8N567 271 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 KLHL23Q8NBE8 558 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 OSBPL6Q9BZF3 934 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 DHX33Q9H6R0 707 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 FEM1BQ9UK73 627 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 IRGMA1A4Y4 181 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 F8VZ95 297 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 ZNF263O14978 683 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 ADAMTS2O95450 1211 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 ATP6V1G2O95670 118 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 HIRAP54198 1017 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 C21orf59P57076 290 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 FCHO2Q0JRZ9 810 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 TAGAPQ8N103 731 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 C18orf8Q96DM3 657 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 DOCK7Q96N67 2140 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 TRMOQ9BU70 441 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 MRPL4Q9BYD3 311 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 TCF7L2Q9NQB0 619 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 DMTF1Q9Y222 760 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 MYO5BQ9ULV0 1848 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 GSAPA4D1B5 854 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 GNPATO15228 680 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 CLDN3O15551 220 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SOAT2O75908 522 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 RRM2P31350 389 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PCBP1Q15365 356 aaKnown RBP eCLIP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 MICALL2Q8IY33 904 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PM20D2Q8IYS1 436 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 OTUD5Q96G74 571 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 VAT1Q99536 393 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 RIT2Q99578 217 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 GORASP1Q9BQQ3 440 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 NPHS2Q9NP85 383 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 CYP39A1Q9NYL5 469 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 AKAP7Q9P0M2 348 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 ZCCHC11Q5TAX3 1644 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 RBM47A0AV96 593 aaKnown RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 RFC5P40937 340 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 BTDP43251 543 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PHKA1P46020 1223 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PPIL2Q13356 520 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 SMCR8Q8TEV9 937 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 UNC45AQ9H3U1 944 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 FLT1P17948 1338 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 IL6P05231 212 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 BMP3P12645 472 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 PRIM2P49643 509 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 BCAP31P51572 246 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 CDC73Q6P1J9 531 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 NLGN1Q8N2Q7 840 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 LENG1Q96BZ8 264 aaPredicted RBP6.82□□□□□ -1.32
VPS13B-202ENST00000357162 BTBD9Q96Q07 612 aa6.82□□□□□ -1.32
VPS13B-202ENST00000357162 CDK5RAP1Q96SZ6 601 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms