RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 LRMPQ12912 555 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 PRSS36Q5K4E3 855 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 PDZD4Q76G19 769 aaPredicted RBP16.25■□□□□ 0.19
UBE3B-201ENST00000340074 DNAJB7Q7Z6W7 309 aaPredicted RBP16.25■□□□□ 0.19
UBE3B-201ENST00000340074 UNC93AQ86WB7 457 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 FAM114A1Q8IWE2 563 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 ZDHHC14Q8IZN3 488 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 STKLD1Q8NE28 680 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 ENOX1Q8TC92 643 aaKnown RBP16.25■□□□□ 0.19
UBE3B-201ENST00000340074 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBE3B-201ENST00000340074 TNIP3Q96KP6 325 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 TWNKQ96RR1 684 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 ARID3AQ99856 593 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 ASAH2Q9NR71 780 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 SAMSN1Q9NSI8 373 aaKnown RBP16.25■□□□□ 0.19
UBE3B-201ENST00000340074 LIMD1Q9UGP4 676 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 ASB3Q9Y575 518 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 PATJQ8NI35 1801 aa16.25■□□□□ 0.19
UBE3B-201ENST00000340074 CLDN5O00501 218 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 MYL4P12829 197 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 MAGEA11P43364 429 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 EPHA5P54756 1037 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 TYRO3Q06418 890 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 VEPH1Q14D04 833 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 DDR2Q16832 855 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 CYP4A22Q5TCH4 519 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 SDHAF4Q5VUM1 108 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 ITIH5Q86UX2 942 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 TMC8Q8IU68 726 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 SCN4BQ8IWT1 228 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 LMO3Q8TAP4 145 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 ING5Q8WYH8 240 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 FGF13Q92913 245 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 TCEAL4Q96EI5 215 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 LRRC3Q9BY71 257 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 B3GNT5Q9BYG0 378 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 NFE2L3Q9Y4A8 694 aa16.24■□□□□ 0.19
UBE3B-201ENST00000340074 NUP210Q8TEM1 1887 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-201ENST00000340074 NRG2O14511 850 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-201ENST00000340074 CILPO75339 1184 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 LAMP2P13473 410 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 CEBPBP17676 345 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 GRIK1P39086 918 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 RPL10AP62906 217 aaKnown RBP16.23■□□□□ 0.19
UBE3B-201ENST00000340074 CUL2Q13617 745 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 NPAS3Q8IXF0 933 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 CRYBG2Q8N1P7 616 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 C12orf29Q8N999 325 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 LEMD2Q8NC56 503 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 WHAMMQ8TF30 809 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 NT5C1BQ96P26 610 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 NT5C1AQ9BXI3 368 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 ZNF518BQ9C0D4 1074 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 ZNF334Q9HCZ1 680 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-201ENST00000340074 CISHQ9NSE2 258 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 MUTYHQ9UIF7 546 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 CDH7Q9ULB5 785 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 MYO16Q9Y6X6 1858 aa16.23■□□□□ 0.19
UBE3B-201ENST00000340074 KCNJ18B7U540 433 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 ZNF197O14709 1029 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 ASGR2P07307 311 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 CCDC130P13994 396 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 GJA1P17302 382 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 KCNJ12Q14500 433 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 TAF12Q16514 161 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 MAN2A1Q16706 1144 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 ZNF394Q53GI3 561 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 POTEHQ6S545 545 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 VSTM1Q6UX27 236 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 ELOVL4Q9GZR5 314 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 EPS15L1Q9UBC2 864 aa16.22■□□□□ 0.19
UBE3B-201ENST00000340074 ZFP37Q9Y6Q3 630 aaPredicted RBP16.22■□□□□ 0.19
UBE3B-201ENST00000340074 A0A1W2PRU2 124 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 MOSPD3O75425 235 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 PRKCSHP14314 528 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-201ENST00000340074 HMGA1P17096 107 aaKnown RBP16.21■□□□□ 0.19
UBE3B-201ENST00000340074 TBXAS1P24557 533 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-201ENST00000340074 CACNA2D1P54289 1103 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 MTMR3Q13615 1198 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 TCP11X2Q5H9J9 407 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 PAQR9Q6ZVX9 377 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 FUKQ8N0W3 1084 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 PPM1KQ8N3J5 372 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 TTC39CQ8N584 583 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 ST13P5Q8NFI4 369 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-201ENST00000340074 MCRS1Q96EZ8 462 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 TUBGCP2Q9BSJ2 902 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 CRACR2AQ9BSW2 395 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 MED10Q9BTT4 135 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 INTS2Q9H0H0 1204 aaKnown RBP16.21■□□□□ 0.19
UBE3B-201ENST00000340074 FAM49BQ9NUQ9 324 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 TMEM30AQ9NV96 361 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 GCNT4Q9P109 453 aa16.21■□□□□ 0.19
UBE3B-201ENST00000340074 MAGED2Q9UNF1 606 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-201ENST00000340074 SLC38A8A6NNN8 435 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 F8VP50 259 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 TRIM66O15016 1216 aa16.2■□□□□ 0.18
UBE3B-201ENST00000340074 MICAL2O94851 1124 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms