RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SMYD3Q9H7B4 428 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 CACNA1AO00555 2505 aa16.32■□□□□ 0.2
PRKN-201ENST00000338468 NCANO14594 1321 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 A0A1W2PRU2 124 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 PPP1R3GB7ZBB8 358 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 LRRN2O75325 713 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 ASS1P00966 412 aaKnown RBP16.31■□□□□ 0.2
PRKN-201ENST00000338468 HLA-DRAP01903 254 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 GNL1P36915 607 aaPredicted RBP16.31■□□□□ 0.2
PRKN-201ENST00000338468 RAP1GAPP47736 663 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 STXBP5Q5T5C0 1151 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 CWF19L1Q69YN2 538 aaKnown RBP16.31■□□□□ 0.2
PRKN-201ENST00000338468 SPOPLQ6IQ16 392 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 TMEM150AQ86TG1 271 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 ITIH5Q86UX2 942 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 TAS1R2Q8TE23 839 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 MYLPFQ96A32 169 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 ASB16Q96NS5 453 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
PRKN-201ENST00000338468 DPEP3Q9H4B8 488 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 SLC2A4RGQ9NR83 387 aa16.31■□□□□ 0.2
PRKN-201ENST00000338468 PTPRDP23468 1912 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 KRBA1A5PL33 1030 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 CETN3O15182 167 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 ECI2O75521 394 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 CFHP08603 1231 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 KRT13P13646 458 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 NPR3P17342 541 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 AOC1P19801 751 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 CCNE1P24864 410 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 GABRR2P28476 465 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 GPC5P78333 572 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 DDR2Q16832 855 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 SGSM1Q2NKQ1 1148 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 ZNF667Q5HYK9 610 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 SCARA5Q6ZMJ2 495 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 CLEC17AQ6ZS10 378 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 SPATA2LQ8IUW3 424 aaPredicted RBP16.3■□□□□ 0.2
PRKN-201ENST00000338468 CCDC105Q8IYK2 499 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 OR6B3Q8NGW1 331 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 MYCBPAPQ8TBZ2 947 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 FAM200AQ8TCP9 573 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 PCED1BQ96HM7 432 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 DHTKD1Q96HY7 919 aaPredicted RBP16.3■□□□□ 0.2
PRKN-201ENST00000338468 FUBP3Q96I24 572 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRKN-201ENST00000338468 DUSP9Q99956 384 aaKnown RBP16.3■□□□□ 0.2
PRKN-201ENST00000338468 SNX25Q9H3E2 840 aa16.3■□□□□ 0.2
PRKN-201ENST00000338468 APOBEC3GQ9HC16 384 aaKnown RBP16.3■□□□□ 0.2
PRKN-201ENST00000338468 BIN1O00499 593 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 PTPN1P18031 435 aaKnown RBP16.29■□□□□ 0.2
PRKN-201ENST00000338468 GTF2H1P32780 548 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 PIK3CAP42336 1068 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 MAGEA11P43364 429 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 ASPAP45381 313 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 FKBP3Q00688 224 aaKnown RBP16.29■□□□□ 0.2
PRKN-201ENST00000338468 LRRC63Q05C16 580 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 VEPH1Q14D04 833 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 MDH1BQ5I0G3 518 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 SIX5Q8N196 739 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 ZSCAN18Q8TBC5 510 aaPredicted RBP16.29■□□□□ 0.2
PRKN-201ENST00000338468 TAF4BQ92750 862 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 ELSPBP1Q96BH3 223 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 RSPRY1Q96DX4 576 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 TSG101Q99816 390 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 MMRN2Q9H8L6 949 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 TRPV4Q9HBA0 871 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 TMEM8AQ9HCN3 771 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.29■□□□□ 0.21e-8■■■■■ 226.9
PRKN-201ENST00000338468 TMEM30AQ9NV96 361 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 WNT16Q9UBV4 365 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 FBXL21Q9UKT6 434 aa16.29■□□□□ 0.2
PRKN-201ENST00000338468 WDR87Q6ZQQ6 2873 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 COL4A3Q01955 1670 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 A8MXQ7 604 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 PSMA7O14818 248 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 SLC16A3O15427 465 aaKnown RBP16.28■□□□□ 0.2
PRKN-201ENST00000338468 NOL4O94818 638 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 F11P03951 625 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 EPB41P11171 864 aaKnown RBP16.28■□□□□ 0.2
PRKN-201ENST00000338468 BDNFP23560 247 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 VIPR2P41587 438 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 RPL10AP62906 217 aaKnown RBP16.28■□□□□ 0.2
PRKN-201ENST00000338468 CYP4F8P98187 520 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 ANGPT1Q15389 498 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 CAMK4Q16566 473 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 TTI2Q6NXR4 508 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 C4orf50Q6ZRC1 276 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 B3GALNT2Q8NCR0 500 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 SEMA4DQ92854 862 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 BCO2Q9BYV7 579 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 ATXN3LQ9H3M9 355 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 MAGEC2Q9UBF1 373 aaPredicted RBP16.28■□□□□ 0.2
PRKN-201ENST00000338468 HMGXB4Q9UGU5 601 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 CA14Q9ULX7 337 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 ZNF292O60281 2723 aa16.28■□□□□ 0.2
PRKN-201ENST00000338468 SLC38A8A6NNN8 435 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 TADA3O75528 432 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 FGF19O95750 216 aa16.27■□□□□ 0.2
PRKN-201ENST00000338468 CACNA2D1P54289 1103 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms