RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 CST5P28325 142 aaPredicted RBP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 RPL34P49207 117 aaKnown RBP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 MRPS6P82932 125 aaKnown RBP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 SKOR1P84550 965 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 CALCOCO2Q13137 446 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 HIC1Q14526 733 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 SV2CQ496J9 727 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 C2CD6Q53TS8 623 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 TFDP3Q5H9I0 405 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 FBXO47Q5MNV8 452 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 ZDHHC24Q6UX98 284 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 FAM43BQ6ZT52 329 aaPredicted RBP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 ADAT2Q7Z6V5 191 aaKnown RBP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 DDX42Q86XP3 938 aaKnown RBP eCLIP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 CPNE8Q86YQ8 564 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 CCDC50Q8IVM0 306 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 CCDC89Q8N998 374 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 ZMAT2Q96NC0 199 aaKnown RBP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 SLITRK1Q96PX8 696 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 TWNKQ96RR1 684 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 CPXM1Q96SM3 734 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 TRIM51Q9BSJ1 452 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 TMEM109Q9BVC6 243 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 TRAIPQ9BWF2 469 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 EIF2AQ9BY44 585 aaKnown RBP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 NEUROG2Q9H2A3 272 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 DPH5Q9H2P9 285 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 PABPC3Q9H361 631 aaKnown RBP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 SYNCQ9H7C4 482 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 FAM204AQ9H8W3 233 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 SLC38A7Q9NVC3 462 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 CYTH4Q9UIA0 394 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 PIN4Q9Y237 131 aaKnown RBP9.53□□□□□ -0.88
SIMC1-201ENST00000332772 TRPV2Q9Y5S1 764 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 NFS1Q9Y697 457 aa9.53□□□□□ -0.88
SIMC1-201ENST00000332772 TCRBV7S2A1N4TA0A589 114 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 ZNF487B1APH4 448 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 M0QYV0 167 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 DPYSL4O14531 572 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 RPS6KA5O75582 802 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 RNF8O76064 485 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 RARGP13631 454 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 FGFR4P22455 802 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 PSMA2P25787 234 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 RFC1P35251 1148 aaPredicted RBP9.52□□□□□ -0.89
SIMC1-201ENST00000332772 RPL21P46778 160 aaKnown RBP9.52□□□□□ -0.89
SIMC1-201ENST00000332772 TAF6P49848 677 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 ZNF143P52747 638 aaPredicted RBP9.52□□□□□ -0.89
SIMC1-201ENST00000332772 OGDHQ02218 1023 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.89
SIMC1-201ENST00000332772 PPP1R7Q15435 360 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 ODF2Q5BJF6 829 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 AGBL2Q5U5Z8 902 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 LLGL2Q6P1M3 1020 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 SPOCD1Q6ZMY3 1216 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 TRMT10CQ7L0Y3 403 aaKnown RBP9.52□□□□□ -0.89
SIMC1-201ENST00000332772 TMEM110Q86TL2 294 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 RELL1Q8IUW5 271 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 TOP6BLQ8N6T0 577 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 SPATA18Q8TC71 538 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 NKD2Q969F2 451 aaPredicted RBP9.52□□□□□ -0.89
SIMC1-201ENST00000332772 SNF8Q96H20 258 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 CFHR5Q9BXR6 569 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 SLC4A5Q9BY07 1137 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 TMBIM4Q9HC24 238 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 HESX1Q9UBX0 185 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 PLAAQ9Y263 795 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 SNX24Q9Y343 169 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 NEU2Q9Y3R4 380 aa9.52□□□□□ -0.89
SIMC1-201ENST00000332772 hCG_1818297A0A087WSY0 165 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 SRRM3A6NNA2 597 aaPredicted RBP9.51□□□□□ -0.89
SIMC1-201ENST00000332772 F8VP50 259 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 SHOX2O60902 331 aaPredicted RBP9.51□□□□□ -0.89
SIMC1-201ENST00000332772 KRT1P04264 644 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 C6orf222P0C671 652 aaPredicted RBP9.51□□□□□ -0.89
SIMC1-201ENST00000332772 MYZAPP0CAP1 466 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 RARBP10826 455 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 CDKN2BP42772 138 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 PSMC4P43686 418 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 ACADSBP45954 432 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 PMS2P54278 862 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 PLTPP55058 493 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 BEX3Q00994 111 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 SLC25A11Q02978 314 aaKnown RBP9.51□□□□□ -0.89
SIMC1-201ENST00000332772 KRT17Q04695 432 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 TMEM62Q0P6H9 643 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 UAP1Q16222 522 aaPredicted RBP9.51□□□□□ -0.89
SIMC1-201ENST00000332772 GNASQ5JWF2 1037 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 SERINC5Q86VE9 423 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 ARFGAP2Q8N6H7 521 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 TRPV1Q8NER1 839 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 CMASQ8NFW8 434 aaPredicted RBP9.51□□□□□ -0.89
SIMC1-201ENST00000332772 FBXO25Q8TCJ0 367 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 SLC35F5Q8WV83 523 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 TMEM40Q8WWA1 233 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 TNIP3Q96KP6 325 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 ATP6V1G3Q96LB4 118 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 CNPY3Q9BT09 278 aa9.51□□□□□ -0.89
SIMC1-201ENST00000332772 NXF3Q9H4D5 531 aaKnown RBP9.51□□□□□ -0.89
SIMC1-201ENST00000332772 HMGXB4Q9UGU5 601 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms