RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 LVRNQ6Q4G3 990 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 CCDC125Q86Z20 511 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ANKMY2Q8IV38 441 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ARFGAP1Q8N6T3 406 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 BANPQ8N9N5 519 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 TTC13Q8NBP0 860 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 FAM13CQ8NE31 585 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ACTL9Q8TC94 416 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 SH3TC2Q8TF17 1288 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 FNIP1Q8TF40 1166 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 TFAP2BQ92481 460 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 PAFAH2Q99487 392 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 TBC1D10AQ9BXI6 508 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 RNPEPL1Q9HAU8 725 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 SAR1AQ9NR31 198 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 KANSL3Q9P2N6 904 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 LNPEPQ9UIQ6 1025 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 HAO1Q9UJM8 370 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ANK1P16157 1881 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 SIGLEC16A6NMB1 481 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 E7ENQ6 273 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 SMAPO00193 183 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 TM9SF1O15321 606 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 MSCO60682 206 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 LRCH4O75427 683 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 EGFRP00533 1210 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 IFNB1P01574 187 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 GM2AP17900 193 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 ADRA1DP25100 572 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 IL1R2P27930 398 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 SSTR1P30872 391 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 RPL22P35268 128 aaKnown RBP9.14□□□□□ -0.95
CLK1-201ENST00000321356 TNFSF9P41273 254 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 RASSF2P50749 326 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 GDF10P55107 478 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 MYL6P60660 151 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 PLCB3Q01970 1234 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 CBLBQ13191 982 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 NAA25Q14CX7 972 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 EFTUD2Q15029 972 aaKnown RBP eCLIP9.14□□□□□ -0.954e-8■■■■□ 23.4
CLK1-201ENST00000321356 MAPK6Q16659 721 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 CTC1Q2NKJ3 1217 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 SGSM1Q2NKQ1 1148 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 KLHL38Q2WGJ6 581 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 PLEKHG4Q58EX7 1191 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 WASHC2DQ5SRD0 308 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 FNBP1LQ5T0N5 605 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 CYP4A22Q5TCH4 519 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 CAPN12Q6ZSI9 719 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 BZW1Q7L1Q6 419 aaKnown RBP9.14□□□□□ -0.95
CLK1-201ENST00000321356 ENDOVQ8N8Q3 282 aaKnown RBP9.14□□□□□ -0.95
CLK1-201ENST00000321356 PYROXD1Q8WU10 500 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 DCAKDQ8WVC6 231 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 ALKBH8Q96BT7 664 aaKnown RBP9.14□□□□□ -0.95
CLK1-201ENST00000321356 TEX13BQ9BXU2 312 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 MTMR12Q9C0I1 747 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 VPS11Q9H270 941 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 ACAD9Q9H845 621 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 NKX1-2Q9UD57 310 aaPredicted RBP9.14□□□□□ -0.95
CLK1-201ENST00000321356 STRIP2Q9ULQ0 834 aa9.14□□□□□ -0.95
CLK1-201ENST00000321356 GOLGA8SH3BPF8 625 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 GOLGA8MH3BSY2 632 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 ABLIM1O14639 778 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 LIN7AO14910 233 aaPredicted RBP9.13□□□□□ -0.95
CLK1-201ENST00000321356 HNRNPCL1O60812 293 aaKnown RBP9.13□□□□□ -0.95
CLK1-201ENST00000321356 TOM1L1O75674 476 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 TMEM63AO94886 807 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 ITGBL1O95965 494 aaPredicted RBP9.13□□□□□ -0.95
CLK1-201ENST00000321356 KRT7P08729 469 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 DHRS4L1P0CG22 281 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 CALB2P22676 271 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 RFC1P35251 1148 aaPredicted RBP9.13□□□□□ -0.95
CLK1-201ENST00000321356 ASPAP45381 313 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 EFNA5P52803 228 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 PTPN20Q4JDL3 420 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 CMPK2Q5EBM0 449 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 CIAPIN1Q6FI81 312 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 NLRP9Q7RTR0 991 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 CLNKQ7Z7G1 428 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 THNSL1Q8IYQ7 743 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 SCYL3Q8IZE3 742 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 ZNF280CQ8ND82 737 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 STK32AQ8WU08 396 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 PCYT2Q99447 389 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 XYLT2Q9H1B5 865 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 LHX5Q9H2C1 402 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 SAE1Q9UBE0 346 aaPredicted RBP9.13□□□□□ -0.95
CLK1-201ENST00000321356 ZNF112Q9UJU3 913 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 NUMBLQ9Y6R0 609 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 MGAMO43451 1857 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 TCRBV7S3A2A0A539 114 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 OGTO15294 1046 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 CST8O60676 142 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 MAFO75444 373 aaPredicted RBP9.13□□□□□ -0.95
CLK1-201ENST00000321356 CBX6O95503 412 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 HOXC6P09630 235 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 TPBGLP0DKB5 382 aa9.13□□□□□ -0.95
CLK1-201ENST00000321356 TROVE2P10155 538 aaKnown RBP eCLIP9.13□□□□□ -0.95
CLK1-201ENST00000321356 HARSP12081 509 aaKnown RBP9.13□□□□□ -0.95
CLK1-201ENST00000321356 KDELR1P24390 212 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms