RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CAMKK1Q8N5S9 505 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 ZSWIM2Q8NEG5 633 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 CACTINQ8WUQ7 758 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 ZC3H10Q96K80 434 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 FAM213AQ9BRX8 229 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 EBF3Q9H4W6 596 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 MRPL44Q9H9J2 332 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 FBRSL1Q9HCM7 1045 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 FBXO2Q9UK22 296 aaPredicted RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 ITGA11Q9UKX5 1188 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 SRPRBQ9Y5M8 271 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 MORC2Q9Y6X9 1032 aaPredicted RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 CNOT1A5YKK6 2376 aaKnown RBP15.29■□□□□ 0.04
RPP40-201ENST00000319533 SPAG17Q6Q759 2223 aa15.29■□□□□ 0.04
RPP40-201ENST00000319533 FRMD3A2A2Y4 597 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 GABRDO14764 452 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 HUS1O60921 280 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 RPP40O75818 363 aaKnown RBP15.28■□□□□ 0.04
RPP40-201ENST00000319533 ITGB3P05106 788 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 ARSAP15289 507 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 GALK1P51570 392 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 TFAMQ00059 246 aaKnown RBP15.28■□□□□ 0.04
RPP40-201ENST00000319533 MYL7Q01449 175 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 FAM160A1Q05DH4 1040 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 ALCAMQ13740 583 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 DDR2Q16832 855 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 FBXO43Q4G163 708 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 PLA2G2CQ5R387 149 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 SCARA3Q6AZY7 606 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 FUBP3Q96I24 572 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPP40-201ENST00000319533 TMEM206Q9H813 350 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 DDX43Q9NXZ2 648 aaKnown RBP15.28■□□□□ 0.04
RPP40-201ENST00000319533 CCDC39Q9UFE4 941 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 SLC8A2Q9UPR5 921 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 PCDHB13Q9Y5F0 798 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 PCDHGA5Q9Y5G8 931 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 CLIC4Q9Y696 253 aa15.28■□□□□ 0.04
RPP40-201ENST00000319533 ZNF638Q14966 1978 aaKnown RBP15.27■□□□□ 0.04
RPP40-201ENST00000319533 SDK1Q7Z5N4 2213 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 AXIN1O15169 862 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 RNF40O75150 1001 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 EGFP01133 1207 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 TCF3P15923 654 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 CYP2F1P24903 491 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 GJA4P35212 333 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 LHX1P48742 406 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 CASP5P51878 434 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 USP4Q13107 963 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 MTF1Q14872 753 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 ZNF77Q15935 545 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 SDHAF4Q5VUM1 108 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 RRAGBQ5VZM2 374 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 CC2D1AQ6P1N0 951 aaPredicted RBP15.27■□□□□ 0.04
RPP40-201ENST00000319533 FAM171BQ6P995 826 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 SV2BQ7L1I2 683 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 KBTBD6Q86V97 674 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 OSTM1Q86WC4 334 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 TOP6BLQ8N6T0 577 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 STKLD1Q8NE28 680 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 SAAL1Q96ER3 474 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 ARRDC1-AS1Q9H2J1 176 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.04
RPP40-201ENST00000319533 GCNT4Q9P109 453 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 SIX4Q9UIU6 781 aa15.27■□□□□ 0.04
RPP40-201ENST00000319533 MAGED2Q9UNF1 606 aaPredicted RBP15.27■□□□□ 0.04
RPP40-201ENST00000319533 MAP1BP46821 2468 aaKnown RBP15.26■□□□□ 0.03
RPP40-201ENST00000319533 EML5Q05BV3 1969 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 STX6O43752 255 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 GCNT3O95395 438 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 ACAT1P24752 427 aaKnown RBP15.26■□□□□ 0.03
RPP40-201ENST00000319533 MAGEA11P43364 429 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 PXNP49023 591 aaPredicted RBP15.26■□□□□ 0.03
RPP40-201ENST00000319533 RBP5P82980 135 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 SYT13Q7L8C5 426 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 DPH6Q7L8W6 267 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 CPA6Q8N4T0 437 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 CSGALNACT2Q8N6G5 542 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 OSCP1Q8WVF1 389 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 EZH1Q92800 747 aaPredicted RBP15.26■□□□□ 0.03
RPP40-201ENST00000319533 EXOC4Q96A65 974 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 P2RY13Q9BPV8 354 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 ECT2Q9H8V3 914 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 GTF3C4Q9UKN8 822 aa15.26■□□□□ 0.03
RPP40-201ENST00000319533 TRAV19A0A0A6YYK7 116 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 KRT37O76014 449 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 USP17L7P0C7H9 530 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 PCSK1P29120 753 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 RESTQ13127 1097 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 SF3A2Q15428 464 aaKnown RBP15.25■□□□□ 0.03
RPP40-201ENST00000319533 SOWAHAQ2M3V2 549 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 EML3Q32P44 896 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 PLK5Q496M5 336 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 NAIF1Q69YI7 327 aaPredicted RBP15.25■□□□□ 0.03
RPP40-201ENST00000319533 ADGRF2Q8IZF7 708 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 CEP295NLQ96MC4 621 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 CLIC6Q96NY7 704 aa15.25■□□□□ 0.03
RPP40-201ENST00000319533 SLC22A12Q96S37 553 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms