RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 MAGOHP61326 146 aaKnown RBP18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 EFEMP1Q12805 493 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 FBXO44Q9H4M3 255 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 TARSL2A2RTX5 802 aaKnown RBP18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 SYF2O95926 243 aaKnown RBP18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 GZMAP12544 262 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 FGFR4P22455 802 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 SERPINB9P50453 376 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 MAP3K7CLP57077 242 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 PTRHD1Q6GMV3 140 aaKnown RBP18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 SLC25A41Q8N5S1 370 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 ZNF507Q8TCN5 953 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 CCDC124Q96CT7 223 aaKnown RBP18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 FRMD8Q9BZ67 464 aaPredicted RBP18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 PCDHAC2Q9Y5I4 1007 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 RIC1Q4ADV7 1423 aa18.47■□□□□ 0.55
CDC42EP3-201ENST00000295324 TLR8Q9NR97 1041 aaKnown RBP18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 BARX2Q9UMQ3 279 aaPredicted RBP18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 PCDHGB4Q9UN71 923 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 USP27XA6NNY8 438 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 ADAM2Q99965 735 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 FBXL5Q9UKA1 691 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 L3MBTL1Q9Y468 752 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 NFASCO94856 1347 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 GTPBP10A4D1E9 387 aaKnown RBP18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 PIK3CDO00329 1044 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 POLBP06746 335 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 MYL4P12829 197 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 STIP1P31948 543 aaKnown RBP18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 PTGER2P43116 358 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 MDM2Q00987 491 aaPredicted RBP18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 FAM47EQ6ZV65 393 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 HERC6Q8IVU3 1022 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 KIRREL3Q8IZU9 778 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 DDI1Q8WTU0 396 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 TFB1MQ8WVM0 346 aaKnown RBP18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 EML4Q9HC35 981 aaKnown RBP18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 NEU2Q9Y3R4 380 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 PDK2Q15119 407 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 RBBP7Q16576 425 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 FBXO38Q6PIJ6 1188 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 TMEM199Q8N511 208 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 SLC25A13Q9UJS0 675 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 UMODL1Q5DID0 1318 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 STX7O15400 261 aaKnown RBP18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 NCLNQ969V3 563 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 BTBD6Q96KE9 485 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 WDR24Q96S15 920 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 CHST12Q9NRB3 414 aa18.46■□□□□ 0.55
CDC42EP3-201ENST00000295324 SLFN11Q7Z7L1 901 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 PRPF4O43172 522 aaKnown RBP eCLIP18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 PSTPIP1O43586 416 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 KCNA2P16389 499 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 TMEM119Q4V9L6 283 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 RAD9BQ6WBX8 426 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 BRSK2Q8IWQ3 736 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 SPDYE5A6NIY4 337 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 XYLBO75191 536 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 PHEXP78562 749 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 MTA1Q13330 715 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 TRMT10CQ7L0Y3 403 aaKnown RBP18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 ELAC2Q9BQ52 826 aaKnown RBP18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 VPS9D1Q9Y2B5 631 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 LIG3P49916 1009 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 USP10Q14694 798 aaKnown RBP18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 FIGNQ5HY92 759 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 ADCK2Q7Z695 626 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 CNPY3Q9BT09 278 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 THAP2Q9H0W7 228 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 PPCSQ9HAB8 311 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 CASS4Q9NQ75 786 aa18.45■□□□□ 0.54
CDC42EP3-201ENST00000295324 SPECC1L-ADORA2AF8WAN1 911 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 PGK1P00558 417 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 PRKAR2AP13861 404 aaKnown RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 SLC8A1P32418 973 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 GEMP55040 296 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 OXCT1P55809 520 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 SYCP2LQ5T4T6 812 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 TIGD7Q6NT04 549 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 CD44P16070 742 aaKnown RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 SPRP35270 261 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 RAP1GAPP47736 663 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 TKTL1P51854 596 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 MTFR1Q15390 333 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 ANKS3Q6ZW76 656 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 UNC45BQ8IWX7 931 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 PNMA5Q96PV4 448 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 HTATIP2Q9BUP3 242 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 FRMD8P1Q9BZ68 369 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 PTK6Q13882 451 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 FAM133BQ5BKY9 247 aaKnown RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 GSPT2Q8IYD1 628 aaKnown RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 GOLPH3Q9H4A6 298 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 CCDC78A2IDD5 438 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 PNMA6AP0CW24 399 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 TUFMP49411 452 aaKnown RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 CAPRIN1Q14444 709 aaKnown RBP18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 TRADDQ15628 312 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 TATDN1Q6P1N9 297 aa18.44■□□□□ 0.54
CDC42EP3-201ENST00000295324 CARD9Q9H257 536 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms