RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PRAMEF18Q5VWM3 479 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 CREG2Q8IUH2 290 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 RUVBL2Q9Y230 463 aaKnown RBP15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 F8W8V4 182 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 TFB1MQ8WVM0 346 aaKnown RBP15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 GID8Q9NWU2 228 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 NYAP2Q9P242 653 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 O00370 1275 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 OPLAHO14841 1288 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 WDR47O94967 919 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 NFKBIAP25963 317 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 SEC23AQ15436 765 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 GANCQ8TET4 914 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 ZKSCAN4Q969J2 545 aaPredicted RBP15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 SPAG6O75602 509 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 PTENP60484 403 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 ZNF677Q86XU0 584 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 ARHGEF19Q8IW93 802 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 FAM136AQ96C01 138 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 ZFYVE19Q96K21 471 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 TLR10Q9BXR5 811 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 PDE2AO00408 941 aaPredicted RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 CBX6O95503 412 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 SHBGP04278 402 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 OR9Q1Q8NGQ5 310 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 MPP4Q96JB8 637 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 DUSP9Q99956 384 aaKnown RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 KLHL4Q9C0H6 718 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 MTMR12Q9C0I1 747 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 LMCD1Q9NZU5 365 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 SNX13Q9Y5W8 968 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 MYBL2P10244 700 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 ARP10275 920 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 CALB2P22676 271 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 TNIP3Q96KP6 325 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 NIF3L1Q9GZT8 377 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 CEMIPQ8WUJ3 1361 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 ALDH5A1P51649 535 aaPredicted RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 RPL10AP62906 217 aaKnown RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 FIGNQ5HY92 759 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 PCYOX1LQ8NBM8 494 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 SEPT8Q92599 483 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 ZNF560Q96MR9 790 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 CYP4F12Q9HCS2 524 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 PIH1D1Q9NWS0 290 aaKnown RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 TAGLN3Q9UI15 199 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 ZBTB24O43167 697 aaPredicted RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 FKBP9O95302 570 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 RARBP10826 455 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 PTPN4P29074 926 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 TFDP3Q5H9I0 405 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 PDPK2PQ6A1A2 396 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 FKBP9P1Q75LS8 142 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 ASAP3Q8TDY4 903 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 PIF1Q9H611 641 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 APPL1Q9UKG1 709 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 ABCE1P61221 599 aaKnown RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 TRADDQ15628 312 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 OASLQ15646 514 aaKnown RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 TRIM16LQ309B1 348 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 CENPPQ6IPU0 288 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 TRAF7Q6Q0C0 670 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 CCDC60Q8IWA6 550 aaPredicted RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 SLC5A5Q92911 643 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 NR1H4Q96RI1 486 aaPredicted RBP15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 NT5C1AQ9BXI3 368 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 KCTD10Q9H3F6 313 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 IGSF9BQ9UPX0 1349 aa15.93■□□□□ 0.14
SHROOM4-201ENST00000289292 P4HA2O15460 535 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 RNF219Q5W0B1 726 aaPredicted RBP15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 RIN3Q8TB24 985 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 ARMCX1Q9P291 453 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 SFMBT1Q9UHJ3 866 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 SATB2Q9UPW6 733 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 MAP2K7O14733 419 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 SLC26A4O43511 780 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 AP1G2O75843 785 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 TMCC1O94876 653 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 NR3C2P08235 984 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 GHRP10912 638 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 PYGMP11217 842 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 KRT72Q14CN4 511 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 SIKE1Q9BRV8 207 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 DCLRE1BQ9H816 532 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 NCF1BA6NI72 391 aaPredicted RBP15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 NCF1CA8MVU1 366 aaPredicted RBP15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 NCF1P14598 390 aaPredicted RBP15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 CPB1P15086 417 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 ELF3P78545 371 aaPredicted RBP15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 SPOCD1Q6ZMY3 1216 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 MIER2Q8N344 545 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 EFHBQ8N7U6 833 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 DLGAP3O95886 979 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 S100A5P33763 92 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 LRRC74AQ0VAA2 488 aa15.92■□□□□ 0.14
SHROOM4-201ENST00000289292 GPR141Q7Z602 305 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms