RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 SEC24CP53992 1094 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 SREBF2Q12772 1141 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 C6orf118Q5T5N4 469 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 CCDC62Q6P9F0 684 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 CENPUQ71F23 418 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 FAM71DQ8N9W8 422 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 CFAP36Q96G28 342 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 PDZD7Q9H5P4 517 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 AVENQ9NQS1 362 aaPredicted RBP9.45□□□□□ -0.9
SEC16A-201ENST00000277537 POMCP01189 267 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 ZSCAN5DPP0CG00 497 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 AKR1A1P14550 325 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 CENPCQ03188 943 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 IFT88Q13099 833 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 C15orf59Q2T9L4 293 aaPredicted RBP9.45□□□□□ -0.9
SEC16A-201ENST00000277537 FAM182AQ5T1J6 154 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 FAXCQ5TGI0 409 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 MDM1Q8TC05 714 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 THOC1Q96FV9 657 aaKnown RBP9.45□□□□□ -0.9
SEC16A-201ENST00000277537 GAD1Q99259 594 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 BEGAINQ9BUH8 593 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 SIK2Q9H0K1 926 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 FZD8Q9H461 694 aa9.45□□□□□ -0.9
SEC16A-201ENST00000277537 WDR91A4D1P6 747 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 A6NNZ2 444 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 O00370 1275 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 CES2O00748 559 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 PSTPIP1O43586 416 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 LSM8O95777 96 aaKnown RBP9.44□□□□□ -0.9
SEC16A-201ENST00000277537 EDN1P05305 212 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 CCDC130P13994 396 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 FKBP1BP68106 108 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 CACNB2Q08289 660 aaPredicted RBP9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ADCY2Q08462 1091 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 SLC10A6Q3KNW5 377 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 TUBB8Q3ZCM7 444 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 LDLRAD1Q5T700 205 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 TTC39CQ8N584 583 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 TTC13Q8NBP0 860 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ACTL9Q8TC94 416 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 PWWP2AQ96N64 755 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 TRAIPQ9BWF2 469 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ZNF518BQ9C0D4 1074 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 PDLIM7Q9NR12 457 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 TUBGCP4Q9UGJ1 667 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ITGA11Q9UKX5 1188 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 NRXN2Q9P2S2 1712 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 CYB561D2O14569 222 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 KCNN4O15554 427 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 TRPA1O75762 1119 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ITIH2P19823 946 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 PHBP35232 272 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 FNTAP49354 379 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 OTUD4Q01804 1114 aaKnown RBP9.44□□□□□ -0.9
SEC16A-201ENST00000277537 RWDD4Q6NW29 188 aaKnown RBP9.44□□□□□ -0.9
SEC16A-201ENST00000277537 SPOCD1Q6ZMY3 1216 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ARHGEF18Q6ZSZ5 1173 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ZNF410Q86VK4 478 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 JOSD2Q8TAC2 188 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ARHGEF2Q92974 986 aaKnown RBP9.44□□□□□ -0.9
SEC16A-201ENST00000277537 LPPQ93052 612 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 CFAP57Q96MR6 1250 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 DNPEPQ9ULA0 475 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 PRG3Q9Y2Y8 225 aaPredicted RBP9.44□□□□□ -0.9
SEC16A-201ENST00000277537 NEU2Q9Y3R4 380 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 B4GALT4O60513 344 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 TSPAN1O60635 241 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 SYF2O95926 243 aaKnown RBP9.44□□□□□ -0.9
SEC16A-201ENST00000277537 HOXC6P09630 235 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ATICP31939 592 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 FLT3LGP49771 235 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 PPP2R2AP63151 447 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ROR1Q01973 937 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 PTPN20Q4JDL3 420 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 TFDP3Q5H9I0 405 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 CHADLQ6NUI6 762 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 EXD1Q8NHP7 514 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 CCHCR1Q8TD31 782 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 EPS8L3Q8TE67 593 aaKnown RBP9.44□□□□□ -0.9
SEC16A-201ENST00000277537 FAM172AQ8WUF8 416 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 LRRN4Q8WUT4 740 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 CAVIN3Q969G5 261 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 VCPIP1Q96JH7 1222 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 ZFP42Q96MM3 310 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 CYP3A43Q9HB55 503 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 TJP2Q9UDY2 1190 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 USP18Q9UMW8 372 aa9.44□□□□□ -0.9
SEC16A-201ENST00000277537 MRPL42Q9Y6G3 142 aaKnown RBP9.44□□□□□ -0.9
SEC16A-201ENST00000277537 RASA4BC9J798 803 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 I3L4J1 428 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 RASA4O43374 803 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 LGR5O75473 907 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 ZBTB48P10074 688 aaPredicted RBP9.43□□□□□ -0.9
SEC16A-201ENST00000277537 ETS1P14921 441 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 MMP8P22894 467 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 ZNF792Q3KQV3 632 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 DCAF12L1Q5VU92 463 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 SLFN11Q7Z7L1 901 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 FAM131BQ86XD5 332 aa9.43□□□□□ -0.9
SEC16A-201ENST00000277537 ADGRF2Q8IZF7 708 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms