RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CYP3A7P24462 503 aa16.08■□□□□ 0.17
TIMP3-201ENST00000266085 AKAP5P24588 427 aa16.08■□□□□ 0.17
TIMP3-201ENST00000266085 SLC29A2Q14542 456 aa16.08■□□□□ 0.17
TIMP3-201ENST00000266085 TAF11Q15544 211 aa16.08■□□□□ 0.17
TIMP3-201ENST00000266085 MAP4K3Q8IVH8 894 aa16.08■□□□□ 0.17
TIMP3-201ENST00000266085 TMEM176AQ96HP8 235 aa16.08■□□□□ 0.17
TIMP3-201ENST00000266085 TINF2Q9BSI4 451 aa16.08■□□□□ 0.17
TIMP3-201ENST00000266085 MMTAG2Q9BU76 263 aaKnown RBP16.08■□□□□ 0.17
TIMP3-201ENST00000266085 FAM237AA0A1B0GTK4 181 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 ATP9AO75110 1047 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 IRF1P10914 325 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 MAGEA9P43362 315 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 MFSD10Q14728 455 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 IMPG1Q17R60 797 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 GIPC2Q8TF65 315 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 FAM47DPA6NHR8 397 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 H0Y3Z8 333 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 CASP5P51878 434 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 HSP90AA5PQ58FG0 334 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 KRT80Q6KB66 452 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 MIB1Q86YT6 1006 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 PPIL6Q8IXY8 311 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 EMC1Q8N766 993 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 PTPRN2Q92932 1015 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 DDX27Q96GQ7 796 aaKnown RBP16.08■□□□□ 0.16
TIMP3-201ENST00000266085 PPP1R2P1Q96PQ5 205 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 FAM129AQ9BZQ8 928 aa16.08■□□□□ 0.16
TIMP3-201ENST00000266085 OLA1Q9NTK5 396 aaKnown RBP16.08■□□□□ 0.16
TIMP3-201ENST00000266085 A0A0A6YYK5 440 aaPredicted RBP16.07■□□□□ 0.16
TIMP3-201ENST00000266085 CASTOR2A6NHX0 329 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 SMIM24O75264 130 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 CHN1P15882 459 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 BCAT1P54687 386 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 AGBL2Q5U5Z8 902 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 DRC3Q9H069 523 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 TSR3Q9UJK0 312 aaKnown RBP16.07■□□□□ 0.16
TIMP3-201ENST00000266085 LSM8O95777 96 aaKnown RBP16.07■□□□□ 0.16
TIMP3-201ENST00000266085 POLBP06746 335 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 ATICP31939 592 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 BEX3Q00994 111 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 FSCN1Q16658 493 aaKnown RBP16.07■□□□□ 0.16
TIMP3-201ENST00000266085 SLC27A1Q6PCB7 646 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 SPATA21Q7Z572 469 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 ZNF606Q8WXB4 792 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 ATG4AQ8WYN0 398 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 ASB7Q9H672 318 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 WDCPQ9H6R7 721 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 PCSK7Q16549 785 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 BRSK2Q8IWQ3 736 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 SEPT8Q92599 483 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 SMYD3Q9H7B4 428 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 SUDS3Q9H7L9 328 aaPredicted RBP16.07■□□□□ 0.16
TIMP3-201ENST00000266085 CPSF2Q9P2I0 782 aaKnown RBP16.07■□□□□ 0.16
TIMP3-201ENST00000266085 TTC36A6NLP5 189 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 ANKRD63C9JTQ0 380 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 GFAPP14136 432 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 HARS2P49590 506 aaKnown RBP16.07■□□□□ 0.16
TIMP3-201ENST00000266085 PSEN2P49810 448 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 ANGPTL8Q6UXH0 198 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 PRMT1Q99873 361 aaKnown RBP16.07■□□□□ 0.16
TIMP3-201ENST00000266085 MUC3BQ9H195 1237 aa16.07■□□□□ 0.16
TIMP3-201ENST00000266085 TIMM13Q9Y5L4 95 aaPredicted RBP16.07■□□□□ 0.16
TIMP3-201ENST00000266085 POMCP01189 267 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 SPRP35270 261 aaPredicted RBP16.06■□□□□ 0.16
TIMP3-201ENST00000266085 LAMB3Q13751 1172 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 ABRAQ8N0Z2 381 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 AGR3Q8TD06 166 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 PORCNQ9H237 461 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 L3MBTL1Q9Y468 752 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 BCL9LQ86UU0 1499 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 WNT7AO00755 349 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 DNAJC6O75061 913 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 LMNAP02545 664 aaKnown RBP16.06■□□□□ 0.16
TIMP3-201ENST00000266085 SNRPAP09012 282 aaKnown RBP16.06■□□□□ 0.16
TIMP3-201ENST00000266085 PTGER2P43116 358 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 PTK7Q13308 1070 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 USP10Q14694 798 aaKnown RBP16.06■□□□□ 0.16
TIMP3-201ENST00000266085 TFDP3Q5H9I0 405 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 CCT8L2Q96SF2 557 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 DYRK4Q9NR20 520 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 NOP53Q9NZM5 478 aaKnown RBP16.06■□□□□ 0.16
TIMP3-201ENST00000266085 SH3BP1Q9Y3L3 701 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 ANKRD26Q9UPS8 1709 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 LRRC10BA6NIK2 292 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 PROSCO94903 275 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 F9P00740 461 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 IL17AQ16552 155 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 CELF3Q5SZQ8 465 aaKnown RBP16.06■□□□□ 0.16
TIMP3-201ENST00000266085 C1orf146Q5VVC0 180 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 TDRD10Q5VZ19 366 aaKnown RBP16.06■□□□□ 0.16
TIMP3-201ENST00000266085 NAPEPLDQ6IQ20 393 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 WDR93Q6P2C0 686 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 NUDT18Q6ZVK8 323 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 FAM131BQ86XD5 332 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 YAF2Q8IY57 180 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 EFHBQ8N7U6 833 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
TIMP3-201ENST00000266085 SNX19Q92543 992 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 DNAJC19Q96DA6 116 aa16.06■□□□□ 0.16
TIMP3-201ENST00000266085 CNPY3Q9BT09 278 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms