RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MTA2O94776 668 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 PAEPP09466 180 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 PRLRP16471 622 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 ORC1Q13415 861 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 MON1BQ7L1V2 547 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 MCOLN2Q8IZK6 566 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 MNS1Q8NEH6 495 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 SPPL3Q8TCT6 385 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 FAM124BQ9H5Z6 455 aaPredicted RBP18.52■□□□□ 0.56
SRSF1-201ENST00000258962 NRDE2Q9H7Z3 1164 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 CTTNBP2NLQ9P2B4 639 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 PCDHGC3Q9UN70 934 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 PACSIN2Q9UNF0 486 aaPredicted RBP18.52■□□□□ 0.56
SRSF1-201ENST00000258962 HYOU1Q9Y4L1 999 aa18.52■□□□□ 0.56
SRSF1-201ENST00000258962 ZNF185O15231 689 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 SPTLC1O15269 473 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 ALDH2P05091 517 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 PBX3P40426 434 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 AFF1P51825 1210 aaKnown RBP18.51■□□□□ 0.55
SRSF1-201ENST00000258962 UBE3AQ05086 875 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 TIGD5Q53EQ6 642 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 PHF13Q86YI8 300 aaPredicted RBP18.51■□□□□ 0.55
SRSF1-201ENST00000258962 MICAL1Q8TDZ2 1067 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 POF1BQ8WVV4 589 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 OSBPL9Q96SU4 736 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 MMS19Q96T76 1030 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 ABCB6Q9NP58 842 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.51■□□□□ 0.55
SRSF1-201ENST00000258962 BARX2Q9UMQ3 279 aaPredicted RBP18.51■□□□□ 0.55
SRSF1-201ENST00000258962 SNX9Q9Y5X1 595 aa18.51■□□□□ 0.55
SRSF1-201ENST00000258962 V9GYY5 206 aaPredicted RBP18.51■□□□□ 0.55
SRSF1-201ENST00000258962 INPPL1O15357 1258 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 LRPAP1P30533 357 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 NSFP46459 744 aaKnown RBP18.5■□□□□ 0.55
SRSF1-201ENST00000258962 SCNN1GP51170 649 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 NDST1P52848 882 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 PTP4A2Q12974 167 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 ZNF280BQ86YH2 543 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 COG1Q8WTW3 980 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 TMEM169Q96HH4 297 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 TMEM176AQ96HP8 235 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 MRPL45Q9BRJ2 306 aaKnown RBP18.5■□□□□ 0.55
SRSF1-201ENST00000258962 NUP85Q9BW27 656 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 AVENQ9NQS1 362 aaPredicted RBP18.5■□□□□ 0.55
SRSF1-201ENST00000258962 MIOSQ9NXC5 875 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 CNOT8Q9UFF9 292 aaKnown RBP18.5■□□□□ 0.55
SRSF1-201ENST00000258962 NME7Q9Y5B8 376 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 CDH23Q9H251 3354 aa18.5■□□□□ 0.55
SRSF1-201ENST00000258962 NT5C1B-RDH14C9J2C7 533 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 DDHD2O94830 711 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 CSPG5O95196 566 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 LSM8O95777 96 aaKnown RBP18.49■□□□□ 0.55
SRSF1-201ENST00000258962 GALTP07902 379 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 CD19P15391 556 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 TCP1P17987 556 aaKnown RBP18.49■□□□□ 0.55
SRSF1-201ENST00000258962 CXCR5P32302 372 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 CDH5P33151 784 aaPredicted RBP18.49■□□□□ 0.55
SRSF1-201ENST00000258962 PLCB3Q01970 1234 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 C2CD6Q53TS8 623 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 DENND1BQ6P3S1 775 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 DAAM2Q86T65 1068 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 NT5DC3Q86UY8 548 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 SYCE1Q8N0S2 351 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 SLC39A11Q8N1S5 342 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 TTC39CQ8N584 583 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 CEP112Q8N8E3 955 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 CAPZA3Q96KX2 299 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 ZNF560Q96MR9 790 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 PSMB7Q99436 277 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 LZTS1Q9Y250 596 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 FAN1Q9Y2M0 1017 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 MYO7AQ13402 2215 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 PDE2AO00408 941 aaPredicted RBP18.49■□□□□ 0.55
SRSF1-201ENST00000258962 KIF4AO95239 1232 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 MYBL1P10243 752 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 RRM1P23921 792 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 PNPLA4P41247 253 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 GRIK3Q13003 919 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 SOWAHAQ2M3V2 549 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 LLGL2Q6P1M3 1020 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 CREG2Q8IUH2 290 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 WDTC1Q8N5D0 677 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 C1orf131Q8NDD1 294 aaKnown RBP18.49■□□□□ 0.55
SRSF1-201ENST00000258962 ZNF564Q8TBZ8 553 aaPredicted RBP18.49■□□□□ 0.55
SRSF1-201ENST00000258962 PPP2R3CQ969Q6 453 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 TRIM11Q96F44 468 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 CALR3Q96L12 384 aaKnown RBP18.49■□□□□ 0.55
SRSF1-201ENST00000258962 C11orf70Q9BRQ4 267 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 TMEM175Q9BSA9 504 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 NSUN3Q9H649 340 aaKnown RBP18.49■□□□□ 0.55
SRSF1-201ENST00000258962 TLR9Q9NR96 1032 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 GDAP2Q9NXN4 497 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 UVRAGQ9P2Y5 699 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 CACNG4Q9UBN1 327 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 DNAJB4Q9UDY4 337 aa18.49■□□□□ 0.55
SRSF1-201ENST00000258962 EFCAB8A8MWE9 144 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 KPNA7A9QM74 516 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 DNAJB1P25685 340 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 OR1G1P47890 313 aa18.48■□□□□ 0.55
SRSF1-201ENST00000258962 SLC11A1P49279 550 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms