RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 STAU1O95793 577 aaKnown RBP22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 CSH1P0DML2 217 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 CSH2P0DML3 217 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 HMGA1P17096 107 aaKnown RBP22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 CD72P21854 359 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 CLDN10P78369 228 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 UBXN2BQ14CS0 331 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 MAPRE1Q15691 268 aaKnown RBP22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 MDH1BQ5I0G3 518 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 DTWD2Q8NBA8 298 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 PJA1Q8NG27 643 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 TMC2Q8TDI7 906 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 DNASE1L2Q92874 299 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 E2F7Q96AV8 911 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 TASP1Q9H6P5 420 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 RMND1Q9NWS8 449 aa22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 MAGEC2Q9UBF1 373 aaPredicted RBP22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 KIF26AQ9ULI4 1882 aaPredicted RBP22.59■■□□□ 1.21
HCFC1R1-201ENST00000248089 KANSL1LA0AUZ9 987 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 SLC38A8A6NNN8 435 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 VNN1O95497 513 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 C4BPAP04003 597 aaKnown RBP22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 BDNFP23560 247 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 RPL13P26373 211 aaKnown RBP22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 PIK3CAP42336 1068 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 RAP1GAPP47736 663 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 NLRP12P59046 1061 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 ZNF667Q5HYK9 610 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 MFSD6LQ8IWD5 586 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 FAM186BQ8IYM0 893 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 ENGASEQ8NFI3 743 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 ERCC4Q92889 916 aaPredicted RBP22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 IRF7Q92985 503 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 PHOX2BQ99453 314 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 DPEP3Q9H4B8 488 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 SMYD3Q9H7B4 428 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 NME7Q9Y5B8 376 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 ANAPC1Q9H1A4 1944 aa22.58■■□□□ 1.21
HCFC1R1-201ENST00000248089 MYH10P35580 1976 aa22.58■■□□□ 1.2
HCFC1R1-201ENST00000248089 A8MXQ7 604 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 ZNF263O14978 683 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 LRRN2O75325 713 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 AKAP3O75969 853 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 PRAMEF12O95522 483 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 TRIM49P0CI25 452 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 TRIM49CP0CI26 452 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 MAGEA11P43364 429 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 VAMP7P51809 220 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 NFIL3Q16649 462 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 MYCBPAPQ8TBZ2 947 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 PCED1BQ96HM7 432 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 SMG9Q9H0W8 520 aaKnown RBP22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 IRF2BPLQ9H1B7 796 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 MMRN2Q9H8L6 949 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 UXTQ9UBK9 157 aaPredicted RBP22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 HOOK1Q9UJC3 728 aaKnown RBP22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 PATJQ8NI35 1801 aa22.57■■□□□ 1.2
HCFC1R1-201ENST00000248089 MAPK13O15264 365 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 NOL4O94818 638 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 SMC2O95347 1197 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 KRT13P13646 458 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 ANXA13P27216 316 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 GRIK1P39086 918 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 CDH8P55286 799 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 ADAM9Q13443 819 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 ZACNQ401N2 412 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 ZCWPW2Q504Y3 356 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 INTS8Q75QN2 995 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 SV2AQ7L0J3 742 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 TMEM150AQ86TG1 271 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 ALYREFQ86V81 257 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 MAB21L3Q8N8X9 362 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 MRPS31Q92665 395 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 SMARCE1Q969G3 411 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 DDX23Q9BUQ8 820 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 SLC46A2Q9BY10 475 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 VRTNQ9H8Y1 702 aa22.56■■□□□ 1.2
HCFC1R1-201ENST00000248089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.56■■□□□ 1.21e-21■■■■■ 521.7
HCFC1R1-201ENST00000248089 PIEZO1Q92508 2521 aa22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 F11P03951 625 aa22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 PTPN1P18031 435 aaKnown RBP22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 HOXD11P31277 338 aaPredicted RBP22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 PSMC2P35998 433 aaKnown RBP22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 C1orf220Q5T0J3 134 aa22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 VSTM1Q6UX27 236 aa22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 B3GALNT2Q8NCR0 500 aa22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 EEF2KMTQ96G04 330 aa22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 TRMT2BQ96GJ1 504 aaKnown RBP22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 GSDMAQ96QA5 445 aa22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 LTB4R2Q9NPC1 389 aa22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 MTF2Q9Y483 593 aaPredicted RBP22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 HELZP42694 1942 aaKnown RBP22.55■■□□□ 1.2
HCFC1R1-201ENST00000248089 FAM170BA6NMN3 283 aa22.54■■□□□ 1.2
HCFC1R1-201ENST00000248089 IKBKBO14920 756 aa22.54■■□□□ 1.2
HCFC1R1-201ENST00000248089 HLA-DRAP01903 254 aa22.54■■□□□ 1.2
HCFC1R1-201ENST00000248089 FAM163BP0C2L3 166 aa22.54■■□□□ 1.2
HCFC1R1-201ENST00000248089 P4HA1P13674 534 aa22.54■■□□□ 1.2
HCFC1R1-201ENST00000248089 DDX6P26196 483 aaKnown RBP eCLIP22.54■■□□□ 1.2
HCFC1R1-201ENST00000248089 AVPR1AP37288 418 aa22.54■■□□□ 1.2
HCFC1R1-201ENST00000248089 PRCPP42785 496 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms