RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 ERBB2P04626 1255 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 HOXC6P09630 235 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 HIF1AQ16665 826 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 RSAD2Q8WXG1 361 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 GINM1Q9NU53 330 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 GPATCH2LQ9NWQ4 482 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 ITGB3P05106 788 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 TARBP2Q15633 366 aaKnown RBP17.7■□□□□ 0.42
SSPN-201ENST00000242729 LVRNQ6Q4G3 990 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 WDR49Q8IV35 697 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 BBOF1Q8ND07 529 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 FBXO36Q8NEA4 188 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 N4BP2L2Q92802 583 aaPredicted RBP17.7■□□□□ 0.42
SSPN-201ENST00000242729 WDR83Q9BRX9 315 aaKnown RBP17.7■□□□□ 0.42
SSPN-201ENST00000242729 NIFKQ9BYG3 293 aaKnown RBP17.7■□□□□ 0.42
SSPN-201ENST00000242729 PDGFCQ9NRA1 345 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 LGALS13Q9UHV8 139 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 CEP83Q9Y592 693 aa17.7■□□□□ 0.42
SSPN-201ENST00000242729 TCRBV5S1A1TA0A578 114 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 OGTO15294 1046 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 MAFO75444 373 aaPredicted RBP17.69■□□□□ 0.42
SSPN-201ENST00000242729 TMEM63AO94886 807 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 ADRA1DP25100 572 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 RGS7P49802 495 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 OAZ1P54368 228 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 SGSM1Q2NKQ1 1148 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 C15orf59Q2T9L4 293 aaPredicted RBP17.69■□□□□ 0.42
SSPN-201ENST00000242729 C1orf228Q6PIY5 440 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 VSIG1Q86XK7 387 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 FBF1Q8TES7 1133 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 CPT1BQ92523 772 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 OTUD5Q96G74 571 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 TRIM56Q9BRZ2 755 aaKnown RBP17.69■□□□□ 0.42
SSPN-201ENST00000242729 XYLT2Q9H1B5 865 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 NPHS2Q9NP85 383 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 EURLQ9NYK6 297 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 GINS2Q9Y248 185 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 CLUHO75153 1309 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 PHIPQ8WWQ0 1821 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 CBX6O95503 412 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 PIGRP01833 764 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 RPL22P35268 128 aaKnown RBP17.69■□□□□ 0.42
SSPN-201ENST00000242729 ATP11AP98196 1134 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 BNIP1Q12981 228 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 MTFR1Q15390 333 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 HHATQ5VTY9 493 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 CENPUQ71F23 418 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 IGDCC3Q8IVU1 814 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 SEPT1Q8WYJ6 367 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 P3H4Q92791 437 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 ZNF112Q9UJU3 913 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 CNTN6Q9UQ52 1028 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 RLFQ13129 1914 aa17.69■□□□□ 0.42
SSPN-201ENST00000242729 C2orf71A6NGG8 1288 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 C19orf81C9J6K1 198 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 ASMTLO95671 621 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 UBR7Q8N806 425 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 C12orf29Q8N999 325 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 NETO2Q8NC67 525 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 GIMAP7Q8NHV1 300 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 SLC17A7Q9P2U7 560 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 CPSF3Q9UKF6 684 aaKnown RBP17.68■□□□□ 0.42
SSPN-201ENST00000242729 C3orf70A6NLC5 250 aaPredicted RBP17.68■□□□□ 0.42
SSPN-201ENST00000242729 M0QYV0 167 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 ATF7IP2Q5U623 682 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 SCYL2Q6P3W7 929 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 SPATA33Q96N06 139 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 PRKAG3Q9UGI9 489 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 ZBTB42B2RXF5 422 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 FAM155BO75949 473 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 MIPP30301 263 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 LMNB2Q03252 620 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 PIGHQ14442 188 aaPredicted RBP17.68■□□□□ 0.42
SSPN-201ENST00000242729 GALNTL6Q49A17 601 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 PREPLQ4J6C6 727 aaPredicted RBP17.68■□□□□ 0.42
SSPN-201ENST00000242729 PPP1R15BQ5SWA1 713 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 PPP1R21Q6ZMI0 780 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 ZBTB8OSQ8IWT0 167 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 PALM2Q8IXS6 379 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 LRRC8CQ8TDW0 803 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 CLMNQ96JQ2 1002 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 HEXIM2Q96MH2 286 aaKnown RBP17.68■□□□□ 0.42
SSPN-201ENST00000242729 LPIN3Q9BQK8 851 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 MAGEB5Q9BZ81 275 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 ELP3Q9H9T3 547 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 RXFP1Q9HBX9 757 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 XPO7Q9UIA9 1087 aaKnown RBP17.68■□□□□ 0.42
SSPN-201ENST00000242729 NR2E3Q9Y5X4 410 aa17.68■□□□□ 0.42
SSPN-201ENST00000242729 GPR25O00155 361 aa17.67■□□□□ 0.42
SSPN-201ENST00000242729 TNNC2P02585 160 aa17.67■□□□□ 0.42
SSPN-201ENST00000242729 EZRP15311 586 aaKnown RBP17.67■□□□□ 0.42
SSPN-201ENST00000242729 SLC25A11Q02978 314 aaKnown RBP17.67■□□□□ 0.42
SSPN-201ENST00000242729 FAM102AQ5T9C2 384 aaPredicted RBP17.67■□□□□ 0.42
SSPN-201ENST00000242729 FAM160B1Q5W0V3 765 aa17.67■□□□□ 0.42
SSPN-201ENST00000242729 EFCAB12Q6NXP0 572 aa17.67■□□□□ 0.42
SSPN-201ENST00000242729 CXCL16Q9H2A7 254 aa17.67■□□□□ 0.42
SSPN-201ENST00000242729 SIX4Q9UIU6 781 aa17.67■□□□□ 0.42
SSPN-201ENST00000242729 CHKBQ9Y259 395 aa17.67■□□□□ 0.42
SSPN-201ENST00000242729 HEY1Q9Y5J3 304 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms