RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ZNF189O75820 626 aaPredicted RBP13.91□□□□□ -0.18
NEK4-201ENST00000233027 GLI1P08151 1106 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 TFE3P19532 575 aaPredicted RBP13.91□□□□□ -0.18
NEK4-201ENST00000233027 VEPH1Q14D04 833 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 ZRANB3Q5FWF4 1079 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 C11orf63Q6NUN7 778 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 ADCK2Q7Z695 626 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 FBXO33Q7Z6M2 555 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 CBWD2Q8IUF1 395 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 ZNF786Q8N393 782 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 FUCA2Q9BTY2 467 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 GPATCH2LQ9NWQ4 482 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 GID8Q9NWU2 228 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 SLC30A1Q9Y6M5 507 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 PRUNE1Q86TP1 453 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 DAGLBQ8NCG7 672 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 SLC20A1Q8WUM9 679 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 SPIRE2Q8WWL2 714 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 PIDD1Q9HB75 910 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 OLFML3Q9NRN5 406 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 L1RE1Q9UN81 338 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 AK9Q5TCS8 1911 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 RHOBTB1O94844 696 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 TWF1Q12792 350 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 TTI2Q6NXR4 508 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 TTC33Q6PID6 262 aaPredicted RBP13.91□□□□□ -0.18
NEK4-201ENST00000233027 ZNF571Q7Z3V5 609 aaPredicted RBP13.91□□□□□ -0.18
NEK4-201ENST00000233027 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
NEK4-201ENST00000233027 KCTD10Q9H3F6 313 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 GTF3C4Q9UKN8 822 aa13.91□□□□□ -0.18
NEK4-201ENST00000233027 MAGEA13PA6NCF6 341 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 KRT8P05787 483 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 PTRHD1Q6GMV3 140 aaKnown RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 MTDHQ86UE4 582 aaKnown RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 SLC47A2Q86VL8 602 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 ELMO3Q96BJ8 720 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 TMEM39BQ9GZU3 492 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 EXOSC4Q9NPD3 245 aaKnown RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 RUVBL2Q9Y230 463 aaKnown RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 CDH2P19022 906 aaPredicted RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 TROAPQ12815 778 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 CYLC2Q14093 348 aaPredicted RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 TMCO5AQ8N6Q1 288 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 LPAR1Q92633 364 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 ABHD8Q96I13 439 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 DYRK4Q9NR20 520 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 MLH1P40692 756 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 GLRBP48167 497 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 MFSD14CQ5VZR4 134 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 OTUB1Q96FW1 271 aaPredicted RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 RIT2Q99578 217 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 TMEM121Q9BTD3 319 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 TMEM120AQ9BXJ8 343 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 NCF1BA6NI72 391 aaPredicted RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 NCF1CA8MVU1 366 aaPredicted RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 NCF1P14598 390 aaPredicted RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 CHRM3P20309 590 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 SOAT1P35610 550 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 SV2CQ496J9 727 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 CCDC60Q8IWA6 550 aaPredicted RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 FAM129AQ9BZQ8 928 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 MTMR12Q9C0I1 747 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 CATSPERBQ9H7T0 1116 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 ARHGAP20Q9P2F6 1191 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 DMGDHQ9UI17 866 aaKnown RBP13.9□□□□□ -0.18
NEK4-201ENST00000233027 PMPCBO75439 489 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 CYP11B1P15538 503 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 TGM2P21980 687 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 ACADSBP45954 432 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 BLOC1S6Q9UL45 172 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 CLCA2Q9UQC9 943 aa13.9□□□□□ -0.18
NEK4-201ENST00000233027 M0R3G1 203 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 GLRA4Q5JXX5 417 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 ACBD5Q5T8D3 534 aaPredicted RBP13.89□□□□□ -0.19
NEK4-201ENST00000233027 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 PRPF18Q99633 342 aaKnown RBP13.89□□□□□ -0.19
NEK4-201ENST00000233027 CBWD1Q9BRT8 395 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 KLK14Q9P0G3 267 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 WHRNQ9P202 907 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 CPS1P31327 1500 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 CD4P01730 458 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 BGNP21810 368 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 SCUBE1Q8IWY4 988 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 CALML6Q8TD86 181 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 UBOX5O94941 541 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 GH1P01241 217 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 SNRPFP62306 86 aaKnown RBP13.89□□□□□ -0.19
NEK4-201ENST00000233027 GIT2Q14161 759 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 WLSQ5T9L3 541 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 RBM43Q6ZSC3 357 aaKnown RBP13.89□□□□□ -0.19
NEK4-201ENST00000233027 ACTRT1Q8TDG2 376 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 DIS3LQ8TF46 1054 aaKnown RBP13.89□□□□□ -0.19
NEK4-201ENST00000233027 DDX50Q9BQ39 737 aaKnown RBP13.89□□□□□ -0.19
NEK4-201ENST00000233027 NEXMIFQ5QGS0 1516 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 ZSCAN5CA6NGD5 496 aaPredicted RBP13.89□□□□□ -0.19
NEK4-201ENST00000233027 SMNDC1O75940 238 aaKnown RBP eCLIP13.89□□□□□ -0.19
NEK4-201ENST00000233027 ACADSP16219 412 aa13.89□□□□□ -0.19
NEK4-201ENST00000233027 OTUD4Q01804 1114 aaKnown RBP13.89□□□□□ -0.19
NEK4-201ENST00000233027 ANKS3Q6ZW76 656 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms