RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 AGTPBP1Q9UPW5 1226 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 CHKBQ9Y259 395 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 STK38LQ9Y2H1 464 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 LRCH4O75427 683 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 IL1R2P27930 398 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 STAT5BP51692 787 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 GEMIN4P57678 1058 aaKnown RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 DYNLT1P63172 113 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 SURF1Q15526 300 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 SMTNL2Q2TAL5 461 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 PRAMEF18Q5VWM3 479 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 ANKRD22Q5VYY1 191 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 BBS12Q6ZW61 710 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 PPIL6Q8IXY8 311 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 ARFGAP1Q8N6T3 406 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 CHST13Q8NET6 341 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 JOSD2Q8TAC2 188 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 CPT1BQ92523 772 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 ERP27Q96DN0 273 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 MRRFQ96E11 262 aaKnown RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 THOC1Q96FV9 657 aaKnown RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 FRMD8P1Q9BZ68 369 aaPredicted RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 XYLT2Q9H1B5 865 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 SSU72Q9NP77 194 aaKnown RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 SAE1Q9UBE0 346 aaPredicted RBP17.1■□□□□ 0.33
LTBR-201ENST00000228918 RABGEF1Q9UJ41 708 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 SNCAIPQ9Y6H5 919 aa17.1■□□□□ 0.33
LTBR-201ENST00000228918 KRT7P08729 469 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 CCND1P24385 295 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 MYO1EQ12965 1108 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 SETDB1Q15047 1291 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 TAZQ16635 292 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 FAM160B1Q5W0V3 765 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 NAT8LQ8N9F0 302 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 ATP11CQ8NB49 1132 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 WDR83Q9BRX9 315 aaKnown RBP17.09■□□□□ 0.33
LTBR-201ENST00000228918 ZWILCHQ9H900 591 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 ETNK1Q9HBU6 452 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 TJP2Q9UDY2 1190 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 SIGLEC16A6NMB1 481 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 NFKBIEO00221 500 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 CST8O60676 142 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 PRKCBP05771 671 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 KRT3P12035 628 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 PHBP35232 272 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 ARL4CP56559 192 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 LACTBP83111 547 aaPredicted RBP17.09■□□□□ 0.33
LTBR-201ENST00000228918 TFAMQ00059 246 aaKnown RBP17.09■□□□□ 0.33
LTBR-201ENST00000228918 TFDP1Q14186 410 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 EFTUD2Q15029 972 aaKnown RBP eCLIP17.09■□□□□ 0.333e-9■■■■■ 48.7
LTBR-201ENST00000228918 MSS51Q4VC12 460 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 TTC13Q8NBP0 860 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 FNIP1Q8TF40 1166 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 C10orf82Q8WW14 230 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 C10orf88Q9H8K7 445 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 CYTH4Q9UIA0 394 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 ZMYND8Q9ULU4 1186 aaPredicted RBP17.09■□□□□ 0.33
LTBR-201ENST00000228918 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
LTBR-201ENST00000228918 A0A0G2JMZ2 1700 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 LRRC37A2A6NM11 1700 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 E7ESA3 106 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 PPP1R12AO14974 1030 aaPredicted RBP17.08■□□□□ 0.33
LTBR-201ENST00000228918 ANP32DO95626 131 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 ITGBL1O95965 494 aaPredicted RBP17.08■□□□□ 0.33
LTBR-201ENST00000228918 KDELR1P24390 212 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 SSTR1P30872 391 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 POLR2BP30876 1174 aaKnown RBP17.08■□□□□ 0.33
LTBR-201ENST00000228918 TCF7P36402 384 aaPredicted RBP17.08■□□□□ 0.33
LTBR-201ENST00000228918 YWHAEP62258 255 aaKnown RBP17.08■□□□□ 0.33
LTBR-201ENST00000228918 KCNT1Q5JUK3 1230 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 FNBP1LQ5T0N5 605 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 HHATQ5VTY9 493 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 SMYD5Q6GMV2 418 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 LVRNQ6Q4G3 990 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 KIAA0319LQ8IZA0 1049 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 PYROXD1Q8WU10 500 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 UTP4Q969X6 686 aaKnown RBP17.08■□□□□ 0.33
LTBR-201ENST00000228918 DHRS4Q9BTZ2 278 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 ADAM33Q9BZ11 813 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 LHX5Q9H2C1 402 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 LRMDAQ9H2I8 198 aa17.08■□□□□ 0.33
LTBR-201ENST00000228918 NOP53Q9NZM5 478 aaKnown RBP17.08■□□□□ 0.33
LTBR-201ENST00000228918 DCTN3O75935 186 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 ATP5HO75947 161 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 ZWINTO95229 277 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 FGFR1P11362 822 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 KRT4P19013 534 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 RPL22P35268 128 aaKnown RBP17.08■□□□□ 0.32
LTBR-201ENST00000228918 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 HADHQ16836 314 aaKnown RBP17.08■□□□□ 0.32
LTBR-201ENST00000228918 IER5Q5VY09 327 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 VSIG1Q86XK7 387 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 LRRC37BQ96QE4 947 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 RAB3IPQ96QF0 476 aaPredicted RBP17.08■□□□□ 0.32
LTBR-201ENST00000228918 ACSS3Q9H6R3 686 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 POLIQ9UNA4 740 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 AFG3L2Q9Y4W6 797 aa17.08■□□□□ 0.32
LTBR-201ENST00000228918 CD19P15391 556 aa17.07■□□□□ 0.32
LTBR-201ENST00000228918 EDNRBP24530 442 aa17.07■□□□□ 0.32
LTBR-201ENST00000228918 MAPK6Q16659 721 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms