RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 EPOPA6NHQ4 379 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 ENC1O14682 589 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 MED7O43513 233 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 EOMESO95936 686 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 ATP1A1P05023 1023 aaKnown RBP13.92□□□□□ -0.18
PHGDH-221ENST00000641573 NSFP46459 744 aaKnown RBP13.92□□□□□ -0.18
PHGDH-221ENST00000641573 NOMO3P69849 1222 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 FAM189BP81408 668 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 CENPCQ03188 943 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 TAP1Q03518 808 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 TCEAL1Q15170 157 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 PLEKHG4Q58EX7 1191 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 PPP1R2P3Q6NXS1 205 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 RHOT2Q8IXI1 618 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 TPCN2Q8NHX9 752 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 SLC35G2Q8TBE7 412 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 PHOSPHO2Q8TCD6 241 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 CPA5Q8WXQ8 436 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 SEPT8Q92599 483 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 ZNF653Q96CK0 615 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 VWCEQ96DN2 955 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 PCDHGC3Q9UN70 934 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 INPP5FQ9Y2H2 1132 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 JRKLQ9Y4A0 524 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 TRIP11Q15643 1979 aa13.92□□□□□ -0.18
PHGDH-221ENST00000641573 PODXLO00592 558 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 INPPL1O15357 1258 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 LSM8O95777 96 aaKnown RBP13.91□□□□□ -0.18
PHGDH-221ENST00000641573 POMCP01189 267 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 CYP1A2P05177 515 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 VDRP11473 427 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 RPL9P32969 192 aaKnown RBP13.91□□□□□ -0.18
PHGDH-221ENST00000641573 LILRA4P59901 499 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 AMPD2Q01433 879 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 NHLH1Q02575 133 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 GRIK3Q13003 919 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 SOWAHAQ2M3V2 549 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 PAPD7Q5XG87 772 aaKnown RBP13.91□□□□□ -0.18
PHGDH-221ENST00000641573 DENND1BQ6P3S1 775 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 FAM43BQ6ZT52 329 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-221ENST00000641573 PHF13Q86YI8 300 aaPredicted RBP13.91□□□□□ -0.18
PHGDH-221ENST00000641573 MCOLN2Q8IZK6 566 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 GJD3Q8N144 294 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 DBF4BQ8NFT6 615 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 TRIM11Q96F44 468 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 HEXIM2Q96MH2 286 aaKnown RBP13.91□□□□□ -0.18
PHGDH-221ENST00000641573 NT5C1AQ9BXI3 368 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 CD320Q9NPF0 282 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 OSGEPQ9NPF4 335 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 CTTNBP2NLQ9P2B4 639 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 CNOT8Q9UFF9 292 aaKnown RBP13.91□□□□□ -0.18
PHGDH-221ENST00000641573 GTF3C4Q9UKN8 822 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 KIAA1257Q9ULG3 409 aa13.91□□□□□ -0.18
PHGDH-221ENST00000641573 CASTOR2A6NHX0 329 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 ENPP3O14638 875 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 HUS1O60921 280 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 MYBL1P10243 752 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 FGFR1P11362 822 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 CDH5P33151 784 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-221ENST00000641573 CLCNKBP51801 687 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 HADHBP55084 474 aaKnown RBP13.9□□□□□ -0.18
PHGDH-221ENST00000641573 TUBB2AQ13885 445 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 SGO2Q562F6 1265 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 GLB1LQ6UWU2 654 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 MON1BQ7L1V2 547 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 LIMS2Q7Z4I7 341 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 UNC93AQ86WB7 457 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 HERC6Q8IVU3 1022 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 TOP6BLQ8N6T0 577 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 LRRC57Q8N9N7 239 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 TMEM35BQ8NCS4 154 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 APPL2Q8NEU8 664 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 OR6B3Q8NGW1 331 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 APBB2Q92870 758 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 CALR3Q96L12 384 aaKnown RBP13.9□□□□□ -0.18
PHGDH-221ENST00000641573 TUBB2BQ9BVA1 445 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 ZNF518BQ9C0D4 1074 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 KCNH6Q9H252 994 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 SNX25Q9H3E2 840 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 ADAM22Q9P0K1 906 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 CDC23Q9UJX2 597 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 L1RE1Q9UN81 338 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 NME7Q9Y5B8 376 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 MRFAP1Q9Y605 127 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 TANC1Q9C0D5 1861 aa13.9□□□□□ -0.18
PHGDH-221ENST00000641573 A8MXQ7 604 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 O00370 1275 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 CYB561D2O14569 222 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 ATMINO43313 823 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 NCK2O43639 380 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 MTA2O94776 668 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 MICAL2O94851 1124 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 PARNO95453 639 aaKnown RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 FTCDO95954 541 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 FAM163BP0C2L3 166 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 WARSP23381 471 aaKnown RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 IGFBP6P24592 240 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-221ENST00000641573 RFC2P35250 354 aa13.89□□□□□ -0.19
PHGDH-221ENST00000641573 GNL1P36915 607 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms