RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 KLHL4Q9C0H6 718 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 ZWINTO95229 277 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 MT-ND3P03897 115 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 C6orf222P0C671 652 aaPredicted RBP14.43□□□□□ -0.1
SCARB2-227ENST00000640957 GMPRP36959 345 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 CDK16Q00536 496 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 PDE1BQ01064 536 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 DBN1Q16643 649 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 ZNF394Q53GI3 561 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 RABGAP1LQ5R372 815 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 AGR3Q8TD06 166 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 GRK7Q8WTQ7 553 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 CYLDQ9NQC7 956 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 ARHGEF4Q9NR80 690 aa14.43□□□□□ -0.1
SCARB2-227ENST00000640957 ATF5Q9Y2D1 282 aaPredicted RBP14.43□□□□□ -0.1
SCARB2-227ENST00000640957 A0A1B0GTW7 788 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 CAPN8A6NHC0 703 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 ABLIM1O14639 778 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 RARBP10826 455 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 MUTP22033 750 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 ANXA13P27216 316 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 AQP5P55064 265 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 GDF10P55107 478 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 TMPRSS15P98073 1019 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 MED21Q13503 144 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 PABPC1LQ4VXU2 614 aaKnown RBP14.42□□□□□ -0.1
SCARB2-227ENST00000640957 MFSD7Q6UXD7 560 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 RNF111Q6ZNA4 994 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 DENND5BQ6ZUT9 1274 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 NLRX1Q86UT6 975 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 HSPBAP1Q96EW2 488 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 ARHGEF38Q9NXL2 777 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 PSMC3IPQ9P2W1 217 aaPredicted RBP14.42□□□□□ -0.1
SCARB2-227ENST00000640957 HSFX1Q9UBD0 423 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 PHF24Q9UPV7 400 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 UMODL1Q5DID0 1318 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 MAGEB2O15479 319 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 GLRA2P23416 452 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 ECE1P42892 770 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 FAAP100Q0VG06 881 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 KCTD21Q4G0X4 260 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 C1orf220Q5T0J3 134 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 CCDC33Q8N5R6 958 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 RNF148Q8N7C7 305 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 FBXO36Q8NEA4 188 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 ADAMTS6Q9UKP5 1117 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 ANGPTL2Q9UKU9 493 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 ARHGEF35A5YM69 484 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 BOLA2-SMG1P6H3BVE0 249 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 ITGA2BP08514 1039 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 BASP1P80723 227 aaKnown RBP14.42□□□□□ -0.1
SCARB2-227ENST00000640957 POLNQ7Z5Q5 900 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 FIZ1Q96SL8 496 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 APOL6Q9BWW8 343 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 COA1Q9GZY4 146 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 HSPBP1Q9NZL4 362 aa14.42□□□□□ -0.1
SCARB2-227ENST00000640957 SMG5Q9UPR3 1016 aaKnown RBP14.42□□□□□ -0.1
SCARB2-227ENST00000640957 TRAFD1O14545 582 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-227ENST00000640957 IL1R1P14778 569 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 YWHAGP61981 247 aaKnown RBP eCLIP14.41□□□□□ -0.1
SCARB2-227ENST00000640957 LSAMPQ13449 338 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 FAXCQ5TGI0 409 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 SCARA3Q6AZY7 606 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 KRT27Q7Z3Y8 459 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 NCAPG2Q86XI2 1143 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 ZCCHC9Q8N567 271 aaKnown RBP14.41□□□□□ -0.1
SCARB2-227ENST00000640957 CLMNQ96JQ2 1002 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 FAM210AQ96ND0 272 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 PLEKHG4BQ96PX9 1271 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 ZNF212Q9UDV6 495 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 CLUHO75153 1309 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 GAS7O60861 476 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 NDUFB10O96000 172 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 DLDP09622 509 aaKnown RBP14.41□□□□□ -0.1
SCARB2-227ENST00000640957 PCSK6P29122 969 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 PEX3P56589 373 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 AP2B1P63010 937 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 CLUL1Q15846 466 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 SYDE2Q5VT97 1194 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 DUS1LQ6P1R4 473 aaKnown RBP14.41□□□□□ -0.1
SCARB2-227ENST00000640957 GALNT4Q8N4A0 578 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 C12orf50Q8NA57 414 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-227ENST00000640957 SMC1BQ8NDV3 1235 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 OR6Y1Q8NGX8 325 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 CNBD2Q96M20 576 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 WDR18Q9BV38 432 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 IQCGQ9H095 443 aaKnown RBP14.41□□□□□ -0.1
SCARB2-227ENST00000640957 TLE6Q9H808 572 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 SAR1AQ9NR31 198 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 CTDP1Q9Y5B0 961 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-227ENST00000640957 SMCHD1A6NHR9 2005 aa14.41□□□□□ -0.1
SCARB2-227ENST00000640957 PLSCR1O15162 318 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 KRT1P04264 644 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 CYP1A2P05177 515 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 F7P08709 466 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-227ENST00000640957 ORC2Q13416 577 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-227ENST00000640957 C6orf163Q5TEZ5 329 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 CES4AQ5XG92 561 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 FOXR2Q6PJQ5 311 aa14.4□□□□□ -0.1
SCARB2-227ENST00000640957 IGDCC3Q8IVU1 814 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms