RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 BBS9Q3SYG4 887 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 KBTBD12Q3ZCT8 623 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 PLEKHN1Q494U1 663 aaPredicted RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 TRIM61Q5EBN2 209 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 C1orf141Q5JVX7 400 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 AADACL4Q5VUY2 407 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 YOD1Q5VVQ6 348 aaPredicted RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 PGBD2Q6P3X8 592 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 PGM2L1Q6PCE3 622 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 DARS2Q6PI48 645 aaKnown RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 OLFM4Q6UX06 510 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 RUFY4Q6ZNE9 571 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 RAB11FIP2Q7L804 512 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 BRAPQ7Z569 592 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 KRT73Q86Y46 540 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 RPAP2Q8IXW5 612 aaPredicted RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 TTC9BQ8N6N2 239 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 TRIML2Q8N7C3 387 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 FAM13CQ8NE31 585 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 OR52K1Q8NGK4 314 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 CEP76Q8TAP6 659 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 PPP1R35Q8TAP8 253 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 GOLGA5Q8TBA6 731 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 MDM1Q8TC05 714 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 SH3RF3Q8TEJ3 882 aaPredicted RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 RFFLQ8WZ73 363 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 RUBCNQ92622 972 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 HTRA1Q92743 480 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 KRT35Q92764 455 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 PTP4A1Q93096 173 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 EXOC4Q96A65 974 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 NSUN4Q96CB9 384 aaKnown RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 TCTN2Q96GX1 697 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 AHCYL2Q96HN2 611 aaKnown RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 TMEM41AQ96HV5 264 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 LOXL4Q96JB6 756 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 CCDC74BQ96LY2 380 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 C7orf26Q96N11 449 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 SAMD11Q96NU1 681 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 TCF25Q9BQ70 676 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 TUBA1CQ9BQE3 449 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 SSBP3Q9BWW4 388 aaPredicted RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 CARD11Q9BXL7 1154 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 TRIM5Q9C035 493 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 UNKQ9C0B0 810 aaKnown RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 B3GNT4Q9C0J1 378 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 PCED1AQ9H1Q7 454 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 EPN3Q9H201 632 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 MAGEH1Q9H213 219 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 VCX3BQ9H321 246 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 EHD1Q9H4M9 534 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 TMEM165Q9HC07 324 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 TM9SF3Q9HD45 589 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 ARHGEF4Q9NR80 690 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 KRT84Q9NSB2 600 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 ADPRHL2Q9NX46 363 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 IL1RAPL1Q9NZN1 696 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 CWC15Q9P013 229 aaKnown RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 ADAM30Q9UKF2 790 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 ITGB1BP2Q9UKP3 347 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 CCPG1Q9ULG6 757 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 CHTOPQ9Y3Y2 248 aaKnown RBP3.25□□□□□ -1.89
VIM-210ENST00000637053 PCDHGB2Q9Y5G2 931 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 HCFC2Q9Y5Z7 792 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 SESN1Q9Y6P5 492 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 NSD2O96028 1365 aa3.25□□□□□ -1.89
VIM-210ENST00000637053 GAKO14976 1311 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 A0A1W2PPL8 197 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ZSCAN5CA6NGD5 496 aaPredicted RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 KPNA5O15131 536 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ASAP2O43150 1006 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 KDM1AO60341 852 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 KERAO60938 352 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 FKTNO75072 461 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 PTP4A3O75365 173 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 TUSC2O75896 110 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 RTN3O95197 1032 aaPredicted RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 OLFM2O95897 454 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CFBP00751 764 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 NPPAP01160 153 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ASLP04424 464 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CHGBP05060 677 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ITGB1P05556 798 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 TPM1P09493 284 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ZBTB48P10074 688 aaPredicted RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 PCNAP12004 261 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 PRKCAP17252 672 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 TFE3P19532 575 aaPredicted RBP3.24□□□□□ -1.89
VIM-210ENST00000637053 KELP23276 732 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 DNAJB1P25685 340 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 IDUAP35475 653 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ADCYAP1R1P41586 468 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 SCNN1BP51168 640 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CASP5P51878 434 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CACNB3P54284 484 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 SLC12A3P55017 1021 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 FOXO4P98177 505 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 CLCQ05315 142 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 ADCY2Q08462 1091 aa3.24□□□□□ -1.89
VIM-210ENST00000637053 KIF5AQ12840 1032 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms