RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 TRIM6Q9C030 488 aaPredicted RBP3.34□□□□□ -1.87
PSPC1-208ENST00000635562 KCNH6Q9H252 994 aa3.34□□□□□ -1.87
PSPC1-208ENST00000635562 VPS33BQ9H267 617 aa3.34□□□□□ -1.87
PSPC1-208ENST00000635562 MANSC1Q9H8J5 431 aa3.34□□□□□ -1.87
PSPC1-208ENST00000635562 CYP4F11Q9HBI6 524 aa3.34□□□□□ -1.87
PSPC1-208ENST00000635562 MAN1C1Q9NR34 630 aa3.34□□□□□ -1.87
PSPC1-208ENST00000635562 ANKEF1Q9NU02 776 aa3.34□□□□□ -1.87
PSPC1-208ENST00000635562 CALCOCO1Q9P1Z2 691 aa3.34□□□□□ -1.87
PSPC1-208ENST00000635562 PDP2Q9P2J9 529 aa3.34□□□□□ -1.87
PSPC1-208ENST00000635562 ZNF112Q9UJU3 913 aa3.34□□□□□ -1.87
PSPC1-208ENST00000635562 RRP15Q9Y3B9 282 aaKnown RBP3.34□□□□□ -1.87
PSPC1-208ENST00000635562 LRRFIP2Q9Y608 721 aaKnown RBP3.34□□□□□ -1.87
PSPC1-208ENST00000635562 FRMPD2Q68DX3 1309 aaPredicted RBP3.34□□□□□ -1.87
PSPC1-208ENST00000635562 ZCCHC6Q5VYS8 1495 aaKnown RBP3.34□□□□□ -1.88
PSPC1-208ENST00000635562 PCSK5Q92824 1860 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 A0A088AWK7 358 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 ERICH4A6NGS2 130 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 F5H423 210 aaPredicted RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 TPP1O14773 563 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 NRP1O14786 923 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 AREL1O15033 823 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 PMM2O15305 246 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 RAMP2O60895 175 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 CCDC175P0C221 793 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 MYBP10242 640 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 NEFHP12036 1026 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 ALOX15P16050 662 aaPredicted RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 RHCEP18577 417 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 PCSK1P29120 753 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 MAPK9P45984 424 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 MAN2A2P49641 1150 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 PAPOLAP51003 745 aaKnown RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 ALDH5A1P51649 535 aaPredicted RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 AK2P54819 239 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 DGCR2P98153 550 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 RHDQ02161 417 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 TLE1Q04724 770 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 FOXL1Q12952 345 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 SP140Q13342 867 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 GRM7Q14831 915 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 RAB39AQ14964 217 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 PRAMEF14Q5SWL7 426 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 RETSATQ6NUM9 610 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 ABRAXAS1Q6UWZ7 409 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 CCBE1Q6UXH8 406 aaPredicted RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 NPNTQ6UXI9 565 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 FASTKD5Q7L8L6 764 aaKnown RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 CATSPER4Q7RTX7 472 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 SGMS1Q86VZ5 419 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 TMPRSS6Q8IU80 811 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 RHOT1Q8IXI2 618 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 ULK2Q8IYT8 1036 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 PQLC1Q8N2U9 271 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 REPS2Q8NFH8 660 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 PLBD2Q8NHP8 589 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 PARD3BQ8TEW8 1205 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 TAF4BQ92750 862 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 RGMAQ96B86 450 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 GCC1Q96CN9 775 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 CEP95Q96GE4 821 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 TNIP3Q96KP6 325 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 NAA15Q9BXJ9 866 aaKnown RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 B3GNT5Q9BYG0 378 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 UNC45AQ9H3U1 944 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 MMRN2Q9H8L6 949 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 AGO3Q9H9G7 860 aaKnown RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 LANCL2Q9NS86 450 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 DIAPH3Q9NSV4 1193 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 ATP8A2Q9NTI2 1148 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 TRMT13Q9NUP7 481 aaKnown RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 TDP1Q9NUW8 608 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 MRGBPQ9NV56 204 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 ARGLU1Q9NWB6 273 aaPredicted RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 UTP6Q9NYH9 597 aaKnown RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 GIMAP2Q9UG22 337 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 GTF3C4Q9UKN8 822 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 FAM184BQ9ULE4 1060 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 L1RE1Q9UN81 338 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 FAM50BQ9Y247 325 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 STXBP5LQ9Y2K9 1186 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 GPR52Q9Y2T5 361 aa3.33□□□□□ -1.88
PSPC1-208ENST00000635562 CENPJQ9HC77 1338 aaPredicted RBP3.33□□□□□ -1.88
PSPC1-208ENST00000635562 LRRC14BA6NHZ5 514 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 CAPN14A8MX76 684 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 NT5C1B-RDH14C9J2C7 533 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 FAM227AF5H4B4 570 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 BOLA2-SMG1P6H3BVE0 249 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 PLSCR1O15162 318 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 GPR32O75388 356 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 CD4P01730 458 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 FTLP02792 175 aaPredicted RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 RPLP2P05387 115 aaKnown RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 ZKSCAN1P17029 563 aaPredicted RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 FPR1P21462 350 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 HTR1BP28222 390 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 HPDP32754 393 aaPredicted RBP3.32□□□□□ -1.88
PSPC1-208ENST00000635562 KRT20P35900 424 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 CASRP41180 1078 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 GRK6P43250 576 aa3.32□□□□□ -1.88
PSPC1-208ENST00000635562 FLT3LGP49771 235 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms