RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 PRSS29PA6NIE9 313 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 LRRC3CA6NJW4 275 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 CGB1A6NKQ9 187 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 TJP3O95049 919 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 IL33O95760 270 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 NDUFB7P17568 137 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 DRD4P21917 467 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 CERS1P27544 350 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 LRPAP1P30533 357 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 ALDH9A1P49189 494 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 CCT8P50990 548 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 MAP2K6P52564 334 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 PROK1P58294 105 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 PSMC1P62191 440 aaKnown RBP3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 NKX6-1P78426 367 aaPredicted RBP3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 KLHL22Q53GT1 634 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 BRDTQ58F21 947 aaPredicted RBP3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 TMEM63BQ5T3F8 832 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 TSTD2Q5T7W7 516 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 LAYNQ6UX15 382 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 CRELD2Q6UXH1 353 aaPredicted RBP3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 AIFM3Q96NN9 605 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 MAP3K14Q99558 947 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 ACTRT3Q9BYD9 372 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 PADI4Q9UM07 663 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 SHOC2Q9UQ13 582 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 MED16Q9Y2X0 877 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 LUC7L2Q9Y383 392 aaKnown RBP3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 PCDHA3Q9Y5H8 950 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 NR2E3Q9Y5X4 410 aa3.68□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 WIPF3A6NGB9 483 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 OFD1O75665 1012 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 ABLIM3O94929 683 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 HNRNPMP52272 730 aaKnown RBP eCLIP3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 SRSF4Q08170 494 aaKnown RBP3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 EZH2Q15910 746 aaKnown RBP3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 LONRF3Q496Y0 759 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 ATAT1Q5SQI0 421 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 RBM20Q5T481 1227 aaKnown RBP3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 SH2D3CQ8N5H7 860 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 RP9Q8TA86 221 aaKnown RBP3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 TNPO1Q92973 898 aaKnown RBP3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 HPS3Q969F9 1004 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 SLC35A4Q96G79 324 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 SMAD5Q99717 465 aaKnown RBP3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 PTDSS2Q9BVG9 487 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 C1orf43Q9BWL3 253 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 ARHGEF3Q9NR81 526 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 ZNF70Q9UC06 446 aaPredicted RBP3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 RGS17Q9UGC6 210 aaPredicted RBP3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 STXBP5LQ9Y2K9 1186 aa3.67□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 H3BML4 177 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 M0QYG6 137 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 MYO1FO00160 1098 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 KIF20AO95235 890 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 NR2F6P10588 404 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 PCSK6P29122 969 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 TOB1P50616 345 aaPredicted RBP3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 IQCB1Q15051 598 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 SLC44A4Q53GD3 710 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 CCDC157Q569K6 752 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 SLC29A4Q7RTT9 530 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 NSUN7Q8NE18 718 aaKnown RBP3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 KLHDC4Q8TBB5 520 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 ZBTB9Q96C00 473 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 GTPBP4Q9BZE4 634 aaKnown RBP3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 NMRK2Q9NPI5 230 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 AGAP1Q9UPQ3 857 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 ZNF804BA4D1E1 1349 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 AOX1Q06278 1338 aa3.66□□□□□ -1.82
NPHP3-ACAD11-202ENST00000632629 A0A088AWK7 358 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 WDR91A4D1P6 747 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 VWC2LB2RUY7 222 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TARM1B6A8C7 271 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TRIM38O00635 465 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 MARCH6O60337 910 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PRKCBP05771 671 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CELA2AP08217 269 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 DLDP09622 509 aaKnown RBP3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 ELFN1P0C7U0 828 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 EBLN1P0CF75 366 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CBSLP0DN79 551 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 HSPA6P17066 643 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 NCLP19338 710 aaKnown RBP3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 CBSP35520 551 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PXNP49023 591 aaPredicted RBP3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SOX8P57073 446 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 E2F2Q14209 437 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PLS1Q14651 629 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TBCCQ15814 346 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 C4orf46Q504U0 113 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SLC30A10Q6XR72 485 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 TSHZ1Q6ZSZ6 1077 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PPP1R3BQ86XI6 285 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 FAM46DQ8NEK8 389 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 KBTBD7Q8WVZ9 684 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 RSPRY1Q96DX4 576 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 SLAMF7Q9NQ25 335 aa3.65□□□□□ -1.83
NPHP3-ACAD11-202ENST00000632629 PIH1D1Q9NWS0 290 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms