RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 DMAC2Q9NW81 257 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 CDH9Q9ULB4 789 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 SIT1Q9Y3P8 196 aa17.05■□□□□ 0.32
CHRNA4-211ENST00000628606 PI15O43692 258 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 PDGFRBP09619 1106 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 FAM163BP0C2L3 166 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 CSH1P0DML2 217 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 CSH2P0DML3 217 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 PSMC3P17980 439 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 ATF6P18850 670 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 RPL13P26373 211 aaKnown RBP17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 GNL1P36915 607 aaPredicted RBP17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 GRM2Q14416 872 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 GPR158Q5T848 1215 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 OR6B3Q8NGW1 331 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 PARD3BQ8TEW8 1205 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 TMEM174Q8WUU8 243 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 ATOH1Q92858 354 aaPredicted RBP17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 IRF7Q92985 503 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 FUBP3Q96I24 572 aaKnown RBP eCLIP17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 SYT15Q9BQS2 421 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 PLA2G2FQ9BZM2 168 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 TRPV4Q9HBA0 871 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 ZNF334Q9HCZ1 680 aaPredicted RBP17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 TMLHEQ9NVH6 421 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 RMND1Q9NWS8 449 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 ZMYM5Q9UJ78 669 aa17.04■□□□□ 0.32
CHRNA4-211ENST00000628606 WARSP23381 471 aaKnown RBP17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 FCARP24071 287 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 CYP2F1P24903 491 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 VIPR2P41587 438 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 CASP4P49662 377 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 STARD6P59095 220 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 TCF15Q12870 199 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 GAREM2Q75VX8 874 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 MFSD6LQ8IWD5 586 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 SCN4BQ8IWT1 228 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 GUF1Q8N442 669 aaKnown RBP17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 ZNF516Q92618 1163 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 DNASE1L2Q92874 299 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 MAGEC2Q9UBF1 373 aaPredicted RBP17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 UXTQ9UBK9 157 aaPredicted RBP17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 NXF1Q9UBU9 619 aaKnown RBP17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 MAGED2Q9UNF1 606 aaPredicted RBP17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 MAPK8IP1Q9UQF2 711 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 TRAF3IP3Q9Y228 551 aa17.03■□□□□ 0.32
CHRNA4-211ENST00000628606 KANSL1LA0AUZ9 987 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 LRRIQ3A6PVS8 624 aaPredicted RBP17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 HEPACAM2A8MVW5 462 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 H0Y858 1186 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 ZNF263O14978 683 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 TACC1O75410 805 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 SMC2O95347 1197 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 KRT13P13646 458 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 P4HA1P13674 534 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 GDI1P31150 447 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 MYL6P60660 151 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 ZNF699Q32M78 642 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 CFAP221Q4G0U5 840 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 ZNF667Q5HYK9 610 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 POTEHQ6S545 545 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 VITQ6UXI7 678 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 LIMS2Q7Z4I7 341 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 ARID3BQ8IVW6 561 aaPredicted RBP17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 CCDC105Q8IYK2 499 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 DTWD2Q8NBA8 298 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 TMC2Q8TDI7 906 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 KBTBD7Q8WVZ9 684 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 TASP1Q9H6P5 420 aa17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 MRPS17Q9Y2R5 130 aaKnown RBP17.02■□□□□ 0.32
CHRNA4-211ENST00000628606 CACNA1HO95180 2353 aa17.02■□□□□ 0.31
CHRNA4-211ENST00000628606 MYBPHLA2RUH7 354 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 NRG2O14511 850 aaPredicted RBP17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 IKBKBO14920 756 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 NCAM2O15394 837 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 STAU1O95793 577 aaKnown RBP17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 NR2F2P24468 414 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 LMO2P25791 158 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 ANXA13P27216 316 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 PSMC1P62191 440 aaKnown RBP17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 CYP27A1Q02318 531 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 ADAM9Q13443 819 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 NCOA4Q13772 614 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 UBXN2BQ14CS0 331 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 DDR2Q16832 855 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 STXBP5Q5T5C0 1151 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 TDRD10Q5VZ19 366 aaKnown RBP17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 FAM171BQ6P995 826 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 ZNF852Q6ZMS4 543 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 FMR1NBQ8N0W7 255 aaPredicted RBP17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 MRPS31Q92665 395 aaKnown RBP17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 NELL2Q99435 816 aa17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 GTPBP4Q9BZE4 634 aaKnown RBP17.01■□□□□ 0.31
CHRNA4-211ENST00000628606 ZNF638Q14966 1978 aaKnown RBP17■□□□□ 0.31
CHRNA4-211ENST00000628606 PIEZO1Q92508 2521 aa17■□□□□ 0.31
CHRNA4-211ENST00000628606 A8MXQ7 604 aa17■□□□□ 0.31
CHRNA4-211ENST00000628606 MAN2B1O00754 1011 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms