RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 GPR88Q9GZN0 384 aa8.33□□□□□ -1.08
NR1I3-235ENST00000628566 ELOVL4Q9GZR5 314 aa8.33□□□□□ -1.08
NR1I3-235ENST00000628566 GZF1Q9H116 711 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-235ENST00000628566 POMKQ9H5K3 350 aa8.33□□□□□ -1.08
NR1I3-235ENST00000628566 UXTQ9UBK9 157 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-235ENST00000628566 ZMYM5Q9UJ78 669 aa8.33□□□□□ -1.08
NR1I3-235ENST00000628566 MRPS23Q9Y3D9 190 aaKnown RBP8.33□□□□□ -1.08
NR1I3-235ENST00000628566 YIPF1Q9Y548 306 aa8.33□□□□□ -1.08
NR1I3-235ENST00000628566 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
NR1I3-235ENST00000628566 SCN1AP35498 2009 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 MYO7AQ13402 2215 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 SMTNL1A8MU46 457 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 PES1O00541 588 aaKnown RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 TRIM66O15016 1216 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 MICAL2O94851 1124 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 SEC24AO95486 1093 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 RHOP08100 348 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 CSH1P0DML2 217 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 CSH2P0DML3 217 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 HAPLN1P10915 354 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 ALADP13716 330 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 PTPN1P18031 435 aaKnown RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 ACAT1P24752 427 aaKnown RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 EEF1GP26641 437 aaKnown RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 MAGEA11P43364 429 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 SLC8A3P57103 927 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 TPM4P67936 248 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 ZP2Q05996 745 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 KCNH2Q12809 1159 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 ARHGAP15Q53QZ3 475 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 C1orf220Q5T0J3 134 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 VSTM1Q6UX27 236 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 GET4Q7L5D6 327 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 LIMS2Q7Z4I7 341 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 TRIM59Q8IWR1 403 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 ZDHHC14Q8IZN3 488 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 TMEM130Q8N3G9 435 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 ATAD1Q8NBU5 361 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 B3GALNT2Q8NCR0 500 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 ENOX1Q8TC92 643 aaKnown RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 KBTBD7Q8WVZ9 684 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 NXPE3Q969Y0 559 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 ZNF707Q96C28 371 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 FAM84AQ96KN4 292 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 CORO1BQ9BR76 489 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 MRPL45Q9BRJ2 306 aaKnown RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 MED10Q9BTT4 135 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 PI4K2AQ9BTU6 479 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 NT5C1AQ9BXI3 368 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 SMYD3Q9H7B4 428 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 AVENQ9NQS1 362 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-235ENST00000628566 GTF3C4Q9UKN8 822 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 COQ4Q9Y3A0 265 aa8.32□□□□□ -1.08
NR1I3-235ENST00000628566 XIRP2A4UGR9 3374 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 TSC2P49815 1807 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 GTPBP10A4D1E9 387 aaKnown RBP8.31□□□□□ -1.08
NR1I3-235ENST00000628566 LOC730098B7Z3J9 87 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 CAVIN2O95810 425 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 WEE2P0C1S8 567 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 MYL4P12829 197 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 CD58P19256 250 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 CDK11BP21127 795 aaKnown RBP8.31□□□□□ -1.08
NR1I3-235ENST00000628566 CDC25CP30307 473 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 GRIK1P39086 918 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 ASPAP45381 313 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 PSMC1P62191 440 aaKnown RBP8.31□□□□□ -1.08
NR1I3-235ENST00000628566 MYL5Q02045 173 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 TYRO3Q06418 890 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 MAN2A1Q16706 1144 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 CBWD6Q4V339 395 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 MDH1BQ5I0G3 518 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 CBWD3Q5JTY5 395 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 CBWD5Q5RIA9 395 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 FAM171BQ6P995 826 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 GBP6Q6ZN66 633 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 MTSS1LQ765P7 747 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 ENOSF1Q7L5Y1 443 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 OSTM1Q86WC4 334 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 SCN4BQ8IWT1 228 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 PPM1KQ8N3J5 372 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 PSMG2Q969U7 264 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 MYLPFQ96A32 169 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 JAKMIP2Q96AA8 810 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 TMEM209Q96SK2 561 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 RTP3Q9BQQ7 232 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 GDE1Q9NZC3 331 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 IGSF9Q9P2J2 1179 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 NFE2L3Q9Y4A8 694 aa8.31□□□□□ -1.08
NR1I3-235ENST00000628566 MYBPHLA2RUH7 354 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 C19orf67A6NJJ6 358 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 BECN2A8MW95 431 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 KCNJ18B7U540 433 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 LMO2P25791 158 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 DDX6P26196 483 aaKnown RBP eCLIP8.3□□□□□ -1.08
NR1I3-235ENST00000628566 RAP1GAPP47736 663 aa8.3□□□□□ -1.08
NR1I3-235ENST00000628566 PPP3CCP48454 512 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms