RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 MLLT6P55198 1093 aaPredicted RBP20.62■□□□□ 0.89
ATG4B-226ENST00000625810 SURF1Q15526 300 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 LMBRD2Q68DH5 695 aaPredicted RBP20.62■□□□□ 0.89
ATG4B-226ENST00000625810 C1orf228Q6PIY5 440 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 GLIS3Q8NEA6 775 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 MSANTD3Q96H12 275 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 LRRC3BQ96PB8 259 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 ACBD6Q9BR61 282 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 EPC1Q9H2F5 836 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 IL21Q9HBE4 155 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 GDAP2Q9NXN4 497 aa20.62■□□□□ 0.89
ATG4B-226ENST00000625810 NUP210Q8TEM1 1887 aaPredicted RBP20.62■□□□□ 0.89
ATG4B-226ENST00000625810 SLC38A8A6NNN8 435 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 ACAT1P24752 427 aaKnown RBP20.61■□□□□ 0.89
ATG4B-226ENST00000625810 MYO1EQ12965 1108 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 INTS6LQ5JSJ4 861 aaKnown RBP20.61■□□□□ 0.89
ATG4B-226ENST00000625810 SHC4Q6S5L8 630 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 MAMSTRQ6ZN01 415 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 TTC8Q8TAM2 541 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 BPIFB1Q8TDL5 484 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 ZFYVE19Q96K21 471 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 IER2Q9BTL4 223 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 KIAA1586Q9HCI6 787 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 INTS13Q9NVM9 706 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 THG1LQ9NWX6 298 aaKnown RBP20.61■□□□□ 0.89
ATG4B-226ENST00000625810 ZMYM5Q9UJ78 669 aa20.61■□□□□ 0.89
ATG4B-226ENST00000625810 MAGED2Q9UNF1 606 aaPredicted RBP20.61■□□□□ 0.89
ATG4B-226ENST00000625810 SMG5Q9UPR3 1016 aaKnown RBP20.61■□□□□ 0.89
ATG4B-226ENST00000625810 ZNF638Q14966 1978 aaKnown RBP20.6■□□□□ 0.89
ATG4B-226ENST00000625810 EIF3DO15371 548 aaKnown RBP eCLIP20.6■□□□□ 0.89
ATG4B-226ENST00000625810 CSH1P0DML2 217 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 CSH2P0DML3 217 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 ZSCAN22P10073 491 aaPredicted RBP20.6■□□□□ 0.89
ATG4B-226ENST00000625810 CHRNB1P11230 501 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 WEE1P30291 646 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 SOX9P48436 509 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 LHX1P48742 406 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 GPR15P49685 360 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 RPL10AP62906 217 aaKnown RBP20.6■□□□□ 0.89
ATG4B-226ENST00000625810 PPP2R5DQ14738 602 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 DUOXA2Q1HG44 320 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 FAM26FQ5R3K3 315 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 SCARA3Q6AZY7 606 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 CBWD2Q8IUF1 395 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 ADGRF2Q8IZF7 708 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 TOP6BLQ8N6T0 577 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 CXorf38Q8TB03 319 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 SPATA18Q8TC71 538 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 LEO1Q8WVC0 666 aaPredicted RBP20.6■□□□□ 0.89
ATG4B-226ENST00000625810 SLC46A2Q9BY10 475 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 FAM126AQ9BYI3 521 aaPredicted RBP20.6■□□□□ 0.89
ATG4B-226ENST00000625810 FAM13BQ9NYF5 915 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 HSPBP1Q9NZL4 362 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 NCDNQ9UBB6 729 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 SIX4Q9UIU6 781 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 GTF3C4Q9UKN8 822 aa20.6■□□□□ 0.89
ATG4B-226ENST00000625810 POLR2DO15514 142 aaKnown RBP20.59■□□□□ 0.89
ATG4B-226ENST00000625810 PRAMEF12O95522 483 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 F13A1P00488 732 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 PCSK1P29120 753 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 AVPR1AP37288 418 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 ME1P48163 572 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 NLRP12P59046 1061 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 PLCB2Q00722 1185 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 LRRC32Q14392 662 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 GAS6Q14393 721 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 SDHAF4Q5VUM1 108 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 OSTM1Q86WC4 334 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 SPATA2LQ8IUW3 424 aaPredicted RBP20.59■□□□□ 0.89
ATG4B-226ENST00000625810 CMTM8Q8IZV2 173 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 CELF5Q8N6W0 485 aaKnown RBP20.59■□□□□ 0.89
ATG4B-226ENST00000625810 MAB21L3Q8N8X9 362 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 RDH13Q8NBN7 331 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 OR5B17Q8NGF7 314 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 ZNF507Q8TCN5 953 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 MRPS31Q92665 395 aaKnown RBP20.59■□□□□ 0.89
ATG4B-226ENST00000625810 HPDLQ96IR7 371 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 C7orf25Q9BPX7 421 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 SMG9Q9H0W8 520 aaKnown RBP20.59■□□□□ 0.89
ATG4B-226ENST00000625810 MAGEF1Q9HAY2 307 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 GTSE1Q9NYZ3 720 aa20.59■□□□□ 0.89
ATG4B-226ENST00000625810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.58■□□□□ 0.89
ATG4B-226ENST00000625810 SPECC1L-ADORA2AF8WAN1 911 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 F11P03951 625 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 HMGA1P17096 107 aaKnown RBP20.58■□□□□ 0.89
ATG4B-226ENST00000625810 CYP2F1P24903 491 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 DDX6P26196 483 aaKnown RBP eCLIP20.58■□□□□ 0.89
ATG4B-226ENST00000625810 HOXD13P35453 343 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 CCR3P51677 355 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 DDR2Q16832 855 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 WDR44Q5JSH3 913 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 CNNM4Q6P4Q7 775 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 UNC13DQ70J99 1090 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 RALGPS2Q86X27 583 aaPredicted RBP20.58■□□□□ 0.89
ATG4B-226ENST00000625810 STKLD1Q8NE28 680 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 ABCB6Q9NP58 842 aa20.58■□□□□ 0.89
ATG4B-226ENST00000625810 UXTQ9UBK9 157 aaPredicted RBP20.58■□□□□ 0.89
ATG4B-226ENST00000625810 DENND4CQ5VZ89 1909 aa20.57■□□□□ 0.88
ATG4B-226ENST00000625810 MYBPHLA2RUH7 354 aa20.57■□□□□ 0.88
ATG4B-226ENST00000625810 CLIC2O15247 247 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms