RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 VCPP55072 806 aaKnown RBP14.54□□□□□ -0.08
CNOT3-210ENST00000618939 MAP7Q14244 749 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 GOLGA7BQ2TAP0 167 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 ITPRIPL1Q6GPH6 555 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 RAB44Q7Z6P3 723 aaPredicted RBP14.54□□□□□ -0.08
CNOT3-210ENST00000618939 VSIG10LQ86VR7 867 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 LRGUKQ96M69 825 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 FRMD8Q9BZ67 464 aaPredicted RBP14.54□□□□□ -0.08
CNOT3-210ENST00000618939 NINJ2Q9NZG7 142 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 O00370 1275 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 CYP1A2P05177 515 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 NQO1P15559 274 aaKnown RBP14.54□□□□□ -0.08
CNOT3-210ENST00000618939 KDSRQ06136 332 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 STX3Q13277 289 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 KCTD19Q17RG1 926 aaPredicted RBP14.54□□□□□ -0.08
CNOT3-210ENST00000618939 FAXCQ5TGI0 409 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 TRIM49D1C9J1S8 452 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 SULT1E1P49888 294 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 PPATQ06203 517 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 MFSD7Q6UXD7 560 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 RFX8Q6ZV50 586 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 ATXN7L3BQ96GX2 97 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 CLMNQ96JQ2 1002 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 TRIM4Q9C037 500 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 PCDH9Q9HC56 1237 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 CALCAP01258 141 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 ENO1P06733 434 aaKnown RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 PTK6Q13882 451 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 LRRC6Q86X45 466 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 CCDC60Q8IWA6 550 aaPredicted RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 OR6J1Q8NGC5 347 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 PPWD1Q96BP3 646 aaKnown RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 SPATS2LQ9NUQ6 558 aaKnown RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 SHOC2Q9UQ13 582 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 EIF4E1BA6NMX2 242 aaKnown RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 SRRM3A6NNA2 597 aaPredicted RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 DNALI1O14645 258 aaPredicted RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 GHRP10912 638 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 SH3BGRP55822 239 aaPredicted RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 SLC51AQ86UW1 340 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 DNERQ8NFT8 737 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 AGAP3Q96P47 875 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 MTO1Q9Y2Z2 717 aaKnown RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 SNED1Q8TER0 1413 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 ATP9BO43861 1147 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 ATP9AO75110 1047 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 VDRP11473 427 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 ELF1P32519 619 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 OAZ1P54368 228 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 TMEM62Q0P6H9 643 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 OVGP1Q12889 678 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 KLC3Q6P597 504 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 METTL7BQ6UX53 244 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 FAM111AQ96PZ2 611 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 CYP4F11Q9HBI6 524 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 A1CFQ9NQ94 594 aaKnown RBP14.53□□□□□ -0.08
CNOT3-210ENST00000618939 SLC24A2Q9UI40 661 aa14.53□□□□□ -0.08
CNOT3-210ENST00000618939 PLSCR1O15162 318 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 MAP3K6O95382 1288 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 GJB6O95452 261 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 PAMP19021 973 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 TARSP26639 723 aaKnown RBP14.52□□□□□ -0.08
CNOT3-210ENST00000618939 MMP14P50281 582 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 ALDH18A1P54886 795 aaKnown RBP14.52□□□□□ -0.08
CNOT3-210ENST00000618939 NFIL3Q16649 462 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 TTC39BQ5VTQ0 682 aaPredicted RBP14.52□□□□□ -0.08
CNOT3-210ENST00000618939 ACAD11Q709F0 780 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 BRSK2Q8IWQ3 736 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 NDUFAF2Q8N183 169 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 APPL2Q8NEU8 664 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 FSD1LQ9BXM9 530 aa14.52□□□□□ -0.08
CNOT3-210ENST00000618939 FANCGO15287 622 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 ADCY3O60266 1144 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 PECAM1P16284 738 aaPredicted RBP14.52□□□□□ -0.09
CNOT3-210ENST00000618939 RAP1GAPP47736 663 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 AP2B1P63010 937 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 PTPN11Q06124 597 aaPredicted RBP14.52□□□□□ -0.09
CNOT3-210ENST00000618939 ASTE1Q2TB18 679 aaPredicted RBP14.52□□□□□ -0.09
CNOT3-210ENST00000618939 ZPBP2Q6X784 338 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 ABI1Q8IZP0 508 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 CCNYL1Q8N7R7 359 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 LRRC57Q8N9N7 239 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 PAFAH2Q99487 392 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 SH3GL2Q99962 352 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 NDE1Q9NXR1 346 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 AGPSO00116 658 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 NUDT17P0C025 328 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 LAMTOR4Q0VGL1 99 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 MDH1BQ5I0G3 518 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 NLRP9Q7RTR0 991 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 C12orf56Q8IXR9 622 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 MIPOL1Q8TD10 442 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 DNPEPQ9ULA0 475 aa14.52□□□□□ -0.09
CNOT3-210ENST00000618939 COL14A1Q05707 1796 aaKnown RBP14.52□□□□□ -0.09
CNOT3-210ENST00000618939 FSBPO95073 299 aa14.51□□□□□ -0.09
CNOT3-210ENST00000618939 PGK2P07205 417 aa14.51□□□□□ -0.09
CNOT3-210ENST00000618939 ATXN2LQ8WWM7 1075 aaKnown RBP14.51□□□□□ -0.09
CNOT3-210ENST00000618939 LBHD1Q9BQE6 289 aaPredicted RBP14.51□□□□□ -0.09
CNOT3-210ENST00000618939 OSBPL1AQ9BXW6 950 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms