RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 H7C4K7 107 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 TNFRSF10AO00220 468 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 GABRDO14764 452 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 SOD2P04179 222 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 PLEKP08567 350 aaPredicted RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 CYP11B1P15538 503 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 POU3F3P20264 500 aaPredicted RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 BMPR1AP36894 532 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 EIF4A3P38919 411 aaKnown RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 PRKCIP41743 596 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 GLUD2P49448 558 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 MRPS5P82675 430 aaKnown RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 MEA1Q16626 185 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 SGO2Q562F6 1265 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 MDH1BQ5I0G3 518 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 RTP2Q5QGT7 225 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 PRSS55Q6UWB4 352 aaPredicted RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 TAS1R1Q7RTX1 841 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 SPRED2Q7Z698 418 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 DDX53Q86TM3 631 aaKnown RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 NOP9Q86U38 636 aaKnown RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 B3GALNT2Q8NCR0 500 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 TRIM44Q96DX7 344 aaPredicted RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 ZNF830Q96NB3 372 aaPredicted RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 TGS1Q96RS0 853 aaKnown RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 CHP1Q99653 195 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 VN1R3Q9BXE9 311 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 ARHGAP20Q9P2F6 1191 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 CDH9Q9ULB4 789 aa13.64□□□□□ -0.23
PRKN-210ENST00000612540 BZW2Q9Y6E2 419 aaKnown RBP13.64□□□□□ -0.23
PRKN-210ENST00000612540 MYO7AQ13402 2215 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 FAM170AA1A519 330 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 EPOPA6NHQ4 379 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 SOWAHDA6NJG2 315 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 RFXAPO00287 272 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 MED7O43513 233 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 AKR1B10O60218 316 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 ATP2C2O75185 946 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 LINC00271P0C7V0 271 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 VDRP11473 427 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 PTPN1P18031 435 aaKnown RBP13.63□□□□□ -0.23
PRKN-210ENST00000612540 TNFAIP3P21580 790 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 ADORA2BP29275 332 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 CDR1P51861 262 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 ARPP19P56211 112 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 TAP1Q03518 808 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 PSMD5Q16401 504 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 CCDC142Q17RM4 750 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 INTS6LQ5JSJ4 861 aaKnown RBP13.63□□□□□ -0.23
PRKN-210ENST00000612540 HGSNATQ68CP4 663 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 ANKS3Q6ZW76 656 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 ZNF571Q7Z3V5 609 aaPredicted RBP13.63□□□□□ -0.23
PRKN-210ENST00000612540 TMTC1Q8IUR5 882 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 OR10T2Q8NGX3 314 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 CCDC42Q96M95 316 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 SAMD11Q96NU1 681 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 AGPAT1Q99943 283 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 LPIN3Q9BQK8 851 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 RTP3Q9BQQ7 232 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 MED10Q9BTT4 135 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 C11orf84Q9BUA3 381 aaPredicted RBP13.63□□□□□ -0.23
PRKN-210ENST00000612540 PLVAPQ9BX97 442 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 NOCTQ9UK39 431 aaKnown RBP13.63□□□□□ -0.23
PRKN-210ENST00000612540 MTCH2Q9Y6C9 303 aa13.63□□□□□ -0.23
PRKN-210ENST00000612540 OR6C75A6NL08 312 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 M0QYV0 167 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 OAZ2O95190 189 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 MMEP08473 750 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 OR4Q2P0C623 313 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 CCDC130P13994 396 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 CPB1P15086 417 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 CYLC1P35663 651 aaPredicted RBP13.62□□□□□ -0.23
PRKN-210ENST00000612540 CDK17Q00537 523 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 CDR2Q01850 454 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 PLCB3Q01970 1234 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 GOLGA7BQ2TAP0 167 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 SMYD5Q6GMV2 418 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 TMEM139Q8IV31 216 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 PASD1Q8IV76 773 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 GLYCTKQ8IVS8 523 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 C12orf29Q8N999 325 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 FBXO22Q8NEZ5 403 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 AUTS2Q8WXX7 1259 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 PIK3R5Q8WYR1 880 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 TFAP2BQ92481 460 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 TMEM209Q96SK2 561 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 ACBD6Q9BR61 282 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 NHEJ1Q9H9Q4 299 aaPredicted RBP13.62□□□□□ -0.23
PRKN-210ENST00000612540 CERS4Q9HA82 394 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 ALG13Q9NP73 1137 aaKnown RBP13.62□□□□□ -0.23
PRKN-210ENST00000612540 CRTAC1Q9NQ79 661 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 ENTPD7Q9NQZ7 604 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 HESX1Q9UBX0 185 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 STK39Q9UEW8 545 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 KIAA1257Q9ULG3 409 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 CEP83Q9Y592 693 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 ATP8B3O60423 1300 aa13.62□□□□□ -0.23
PRKN-210ENST00000612540 NCOR1O75376 2440 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms