RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 C1orf131Q8NDD1 294 aaKnown RBP18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 APPL2Q8NEU8 664 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 FAM49BQ9NUQ9 324 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 CALCOCO1Q9P1Z2 691 aa18.42■□□□□ 0.54
PPFIA3-207ENST00000602716 ACAT1P24752 427 aaKnown RBP18.41■□□□□ 0.54
PPFIA3-207ENST00000602716 RFC2P35250 354 aa18.41■□□□□ 0.54
PPFIA3-207ENST00000602716 NPAS4Q8IUM7 802 aa18.41■□□□□ 0.54
PPFIA3-207ENST00000602716 EXOC4Q96A65 974 aa18.41■□□□□ 0.54
PPFIA3-207ENST00000602716 NT5C1AQ9BXI3 368 aa18.41■□□□□ 0.54
PPFIA3-207ENST00000602716 NRDE2Q9H7Z3 1164 aa18.41■□□□□ 0.54
PPFIA3-207ENST00000602716 TSC2P49815 1807 aa18.41■□□□□ 0.54
PPFIA3-207ENST00000602716 TBKBP1A7MCY6 615 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 A8MXQ7 604 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 O00370 1275 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 HUS1O60921 280 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 TACC1O75410 805 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 PSMC1P62191 440 aaKnown RBP18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 RNASELQ05823 741 aaKnown RBP18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 IKBKEQ14164 716 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 CASP8Q14790 479 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 KIAA0319Q5VV43 1072 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 PHLDB2Q86SQ0 1253 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 C7orf61Q8IZ16 206 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 ABI1Q8IZP0 508 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 TOP6BLQ8N6T0 577 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 HEXIM2Q96MH2 286 aaKnown RBP18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 PSD3Q9NYI0 1048 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 CYTH4Q9UIA0 394 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 ADAM21Q9UKJ8 722 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 SRGAP2O75044 1071 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 ATP2C2O75185 946 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 OR1G1P47890 313 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 GYS2P54840 703 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 CKAP4Q07065 602 aaKnown RBP18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 FAM117BQ6P1L5 589 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 DSTYKQ6XUX3 929 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 C16orf59Q7L2K0 433 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 WDTC1Q8N5D0 677 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 RPGRIP1Q96KN7 1286 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 OSGEPQ9NPF4 335 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 TJP2Q9UDY2 1190 aa18.4■□□□□ 0.54
PPFIA3-207ENST00000602716 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.4■□□□□ 0.542e-7■■■■■ 63.3
PPFIA3-207ENST00000602716 NCANO14594 1321 aa18.39■□□□□ 0.54
PPFIA3-207ENST00000602716 RTN2O75298 545 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 MICAL2O94851 1124 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 TMEM253P0C7T8 217 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 GZMAP12544 262 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 WARSP23381 471 aaKnown RBP18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 EPHB4P54760 987 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 BCAR1P56945 870 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 CENPCQ03188 943 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 ACAD10Q6JQN1 1059 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 TMEM173Q86WV6 379 aaPredicted RBP18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 SECISBP2LQ93073 1101 aaKnown RBP18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 DDX27Q96GQ7 796 aaKnown RBP18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 TSGA10Q9BZW7 698 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 GOLPH3Q9H4A6 298 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 COG5Q9UP83 839 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 STXBP5LQ9Y2K9 1186 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 ATP8B3O60423 1300 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 CCDC130P13994 396 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 GNL1P36915 607 aaPredicted RBP18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 WDR5P61964 334 aaKnown RBP18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 C10orf76Q5T2E6 689 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 PPP1R26Q5T8A7 1209 aaPredicted RBP18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 MON1BQ7L1V2 547 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 RSPH1Q8WYR4 309 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 BADQ92934 168 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 UROC1Q96N76 676 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 RTP3Q9BQQ7 232 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 C11orf70Q9BRQ4 267 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 SNX25Q9H3E2 840 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 PCDHGC3Q9UN70 934 aa18.39■□□□□ 0.53
PPFIA3-207ENST00000602716 TARSL2A2RTX5 802 aaKnown RBP18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 M0QYV0 167 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 GABRDO14764 452 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 SYN1P17600 705 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 TKTP29401 623 aaKnown RBP18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 SLC11A1P49279 550 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 MMS22LQ6ZRQ5 1243 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 OTOP2Q7RTS6 562 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 TMEM199Q8N511 208 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 BCL7CQ8WUZ0 217 aaPredicted RBP18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 ZNF653Q96CK0 615 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 LUC7LQ9NQ29 371 aaKnown RBP18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 MARCH5Q9NX47 278 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 TSPAN16Q9UKR8 245 aa18.38■□□□□ 0.53
PPFIA3-207ENST00000602716 ANKRD62A6NC57 917 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 VDRP11473 427 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 CAPN2P17655 700 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 MCM3P25205 808 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 HNRNPH2P55795 449 aaKnown RBP18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 PTP4A2Q12974 167 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 GOLGA7BQ2TAP0 167 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 SGO2Q562F6 1265 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 UNC93AQ86WB7 457 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 TTC30AQ86WT1 665 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 UBA3Q8TBC4 463 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 CAPZA3Q96KX2 299 aa18.37■□□□□ 0.53
PPFIA3-207ENST00000602716 KANSL3Q9P2N6 904 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms