RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF124Q15973 351 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 PKN2Q16513 984 aaKnown RBP9.27□□□□□ -0.93
COMMD3-215ENST00000602574 DUSP7Q16829 419 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 USPL1Q5W0Q7 1092 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 C15orf52Q6ZUT6 534 aaKnown RBP9.27□□□□□ -0.93
COMMD3-215ENST00000602574 MARVELD2Q8N4S9 558 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 CASKIN2Q8WXE0 1202 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 RBM18Q96H35 190 aaKnown RBP9.27□□□□□ -0.93
COMMD3-215ENST00000602574 LLPHQ9BRT6 129 aaKnown RBP9.27□□□□□ -0.93
COMMD3-215ENST00000602574 WACQ9BTA9 647 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 ACAT2Q9BWD1 397 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 MROQ9BYG7 248 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 OR2B2Q9GZK3 357 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 MKRN2Q9H000 416 aaKnown RBP9.27□□□□□ -0.93
COMMD3-215ENST00000602574 CUEDC2Q9H467 287 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 ACAD9Q9H845 621 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 GPAMQ9HCL2 828 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 USP40Q9NVE5 1235 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 ASNSD1Q9NWL6 643 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 VPS4AQ9UN37 437 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 ERGIC3Q9Y282 383 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 PCDHGA10Q9Y5H3 936 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 EID1Q9Y6B2 187 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 AGLP35573 1532 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 FLT1P17948 1338 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 PNPLA7Q6ZV29 1317 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 PITPNM2Q9BZ72 1349 aa9.27□□□□□ -0.93
COMMD3-215ENST00000602574 EVPLLA8MZ36 301 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 PDPK1O15530 556 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 ITM2AO43736 263 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 CD48P09326 243 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 INHBBP09529 407 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 RARGP13631 454 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 SLC26A2P50443 739 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 POU6F1Q14863 301 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 OXA1LQ15070 435 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 TAF1CQ15572 869 aaPredicted RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 PLEKHG6Q3KR16 790 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 C6orf132Q5T0Z8 1188 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 CCDC25Q86WR0 208 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 VGLL2Q8N8G2 317 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 C12orf50Q8NA57 414 aaPredicted RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 KCNH5Q8NCM2 988 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 OR6Y1Q8NGX8 325 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 GRPEL2Q8TAA5 225 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 TRUB1Q8WWH5 349 aaKnown RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 RANBP9Q96S59 729 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 TMEM109Q9BVC6 243 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 BTBD2Q9BX70 525 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 INTS2Q9H0H0 1204 aaKnown RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 VPS11Q9H270 941 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 ARMC7Q9H6L4 198 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 EPB41L5Q9HCM4 733 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 CABP2Q9NPB3 220 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 PCDHA7Q9UN72 937 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 TSPOAP1O95153 1857 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 PCDH11YQ9BZA8 1340 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 CYP2D7A0A087X1C5 515 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 PRSS47A8MTI9 375 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 RNF103O00237 685 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 HOXC11O43248 304 aaPredicted RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 GABBR2O75899 941 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 KRT36O76013 467 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 RGS20O76081 388 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 HAUS5O94927 633 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 GYPCP04921 128 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 NUDT17P0C025 328 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 CMA1P23946 247 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 HCAR3P49019 387 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 PRAMEP78395 509 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 TAP1Q03518 808 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 ACSBG2Q5FVE4 666 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 ZC3H12BQ5HYM0 836 aaKnown RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 APOA5Q6Q788 366 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 ANGPTL8Q6UXH0 198 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 APTXQ7Z2E3 356 aaKnown RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 PM20D2Q8IYS1 436 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 REXO1Q8N1G1 1221 aaKnown RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 FBXL6Q8N531 539 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 ZNF565Q8N9K5 539 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 SIMC1Q8NDZ2 872 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 CHAC2Q8WUX2 184 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 IPCEF1Q8WWN9 437 aaPredicted RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 FAM167AQ96KS9 214 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 BEGAINQ9BUH8 593 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 C9orf16Q9BUW7 83 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 KLHL25Q9H0H3 589 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 TMEM60Q9H2L4 133 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 MMRN2Q9H8L6 949 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 POLE3Q9NRF9 147 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 EVLQ9UI08 416 aaPredicted RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 LAMP5Q9UJQ1 280 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 POU2F3Q9UKI9 436 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 ZNF175Q9Y473 711 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 KLF2Q9Y5W3 355 aaPredicted RBP9.26□□□□□ -0.93
COMMD3-215ENST00000602574 SNX8Q9Y5X2 465 aa9.26□□□□□ -0.93
COMMD3-215ENST00000602574 SNX5Q9Y5X3 404 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms