RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 MAPRE1Q15691 268 aaKnown RBP17.84■□□□□ 0.45
USHBP1-208ENST00000598309 WDR72Q3MJ13 1102 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 CWF19L1Q69YN2 538 aaKnown RBP17.84■□□□□ 0.45
USHBP1-208ENST00000598309 FAM171BQ6P995 826 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 INTS8Q75QN2 995 aaKnown RBP17.84■□□□□ 0.45
USHBP1-208ENST00000598309 ST13P5Q8NFI4 369 aaPredicted RBP17.84■□□□□ 0.45
USHBP1-208ENST00000598309 SYT15Q9BQS2 421 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 TRPV4Q9HBA0 871 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 ZFP14Q9HCL3 533 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 ZNF334Q9HCZ1 680 aaPredicted RBP17.84■□□□□ 0.45
USHBP1-208ENST00000598309 ARHGEF3Q9NR81 526 aa17.84■□□□□ 0.45
USHBP1-208ENST00000598309 NPR3P17342 541 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 CDC25CP30307 473 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 PLA2G5P39877 138 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 RPL10AP62906 217 aaKnown RBP17.83■□□□□ 0.44
USHBP1-208ENST00000598309 GPC5P78333 572 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 NCOA4Q13772 614 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 ZACNQ401N2 412 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 ZNF658Q5TYW1 1059 aaPredicted RBP17.83■□□□□ 0.44
USHBP1-208ENST00000598309 TANGO2Q6ICL3 276 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 C4orf50Q6ZRC1 276 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 GAREM2Q75VX8 874 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 SPATA2LQ8IUW3 424 aaPredicted RBP17.83■□□□□ 0.44
USHBP1-208ENST00000598309 SMARCE1Q969G3 411 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 E2F7Q96AV8 911 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 ZSWIM3Q96MP5 696 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 MRPL45Q9BRJ2 306 aaKnown RBP17.83■□□□□ 0.44
USHBP1-208ENST00000598309 PI4K2AQ9BTU6 479 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 ZMYM5Q9UJ78 669 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 GTF3C4Q9UKN8 822 aa17.83■□□□□ 0.44
USHBP1-208ENST00000598309 MYBPHLA2RUH7 354 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 KRBA1A5PL33 1030 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 HCRTO43612 131 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 KINO60870 393 aaKnown RBP17.82■□□□□ 0.44
USHBP1-208ENST00000598309 AKAP3O75969 853 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 GJA1P17302 382 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 AOC1P19801 751 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 LMO2P25791 158 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 GABRR2P28476 465 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 PSMC2P35998 433 aaKnown RBP17.82■□□□□ 0.44
USHBP1-208ENST00000598309 MAGEA11P43364 429 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 VAMP7P51809 220 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 DLG4P78352 724 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 TAF12Q16514 161 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 ZNF699Q32M78 642 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 ARHGAP15Q53QZ3 475 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 PHLDB3Q6NSJ2 640 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 SMYD4Q8IYR2 804 aaPredicted RBP17.82■□□□□ 0.44
USHBP1-208ENST00000598309 TMEM105Q8N8V8 129 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 ZSCAN18Q8TBC5 510 aaPredicted RBP17.82■□□□□ 0.44
USHBP1-208ENST00000598309 DEPDC1BQ8WUY9 529 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 TAF4BQ92750 862 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 GCNAQ96QF7 691 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 MKNK1Q9BUB5 465 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 SNX25Q9H3E2 840 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 ATXN3LQ9H3M9 355 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 SLITRK6Q9H5Y7 841 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 IL21Q9HBE4 155 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 CRTAC1Q9NQ79 661 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 CA14Q9ULX7 337 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 PCDHA5Q9Y5H7 936 aa17.82■□□□□ 0.44
USHBP1-208ENST00000598309 VNN1O95497 513 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 CSH1P0DML2 217 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 CSH2P0DML3 217 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 KRT13P13646 458 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 CYP2F1P24903 491 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 WEE1P30291 646 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 GNL1P36915 607 aaPredicted RBP17.81■□□□□ 0.44
USHBP1-208ENST00000598309 CDR1P51861 262 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 MCCD1P59942 119 aaPredicted RBP17.81■□□□□ 0.44
USHBP1-208ENST00000598309 PSMC1P62191 440 aaKnown RBP17.81■□□□□ 0.44
USHBP1-208ENST00000598309 ADAM9Q13443 819 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 CCDC142Q17RM4 750 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 ZNF667Q5HYK9 610 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 C1orf220Q5T0J3 134 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 IER5LQ5T953 404 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 SV2AQ7L0J3 742 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 FAM186BQ8IYM0 893 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 FLCNQ8NFG4 579 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 MYCBPAPQ8TBZ2 947 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 GIPC2Q8TF65 315 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 DNASE1L2Q92874 299 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 MYLPFQ96A32 169 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 FAM122AQ96E09 287 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 SHDQ96IW2 340 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 CEP295NLQ96MC4 621 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 PLA2G2FQ9BZM2 168 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 CHMP5Q9NZZ3 219 aa17.81■□□□□ 0.44
USHBP1-208ENST00000598309 NXF1Q9UBU9 619 aaKnown RBP17.81■□□□□ 0.44
USHBP1-208ENST00000598309 ATP2C2O75185 946 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 NOL4O94818 638 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 P4HA1P13674 534 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 HMGA1P17096 107 aaKnown RBP17.8■□□□□ 0.44
USHBP1-208ENST00000598309 PSMC3P17980 439 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 PRCPP42785 496 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 PRKCQQ04759 706 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 SGSM1Q2NKQ1 1148 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 VSTM1Q6UX27 236 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 PRSS33Q8NF86 280 aa17.8■□□□□ 0.44
USHBP1-208ENST00000598309 OR6B3Q8NGW1 331 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms