RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 CCNG1P51959 295 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 HK2P52789 917 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 COPAP53621 1224 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 MCCD1P59942 119 aaPredicted RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 STX1BP61266 288 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 KCNJ2P63252 427 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 OCRLQ01968 901 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 CDK18Q07002 472 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 CUL2Q13617 745 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 THOC5Q13769 683 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 SKIV2LQ15477 1246 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 FAM98CQ17RN3 349 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 DUOXA2Q1HG44 320 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 TKFCQ3LXA3 575 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 SLC27A3Q5K4L6 730 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 KLC3Q6P597 504 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 OTOP1Q7RTM1 612 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 POLNQ7Z5Q5 900 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 PALB2Q86YC2 1186 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 KIAA0825Q8IV33 1275 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 PPM1NQ8N819 430 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 RBM46Q8TBY0 533 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 ZFAND2BQ8WV99 257 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 OPTNQ96CV9 577 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ZDHHC15Q96MV8 337 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 PAFAH2Q99487 392 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 TTC1Q99614 292 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ADPGKQ9BRR6 497 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 TRIM56Q9BRZ2 755 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 TBC1D10AQ9BXI6 508 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 KLHL4Q9C0H6 718 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 CREBZFQ9NS37 354 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 SRP68Q9UHB9 627 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 DCDC2Q9UHG0 476 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 IPO11Q9UI26 975 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 GGT7Q9UJ14 662 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ARHGAP26Q9UNA1 814 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 AKAP11Q9UKA4 1901 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 DOCK2Q92608 1830 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 RSPH10B2B2RC85 870 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 GOLGA8SH3BPF8 625 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 APOL1O14791 398 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 WDR46O15213 610 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 PSMD3O43242 534 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 MAGEC1O60732 1142 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 SLITRK3O94933 977 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 LYPLA2O95372 231 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 GDF11O95390 407 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 HLA-DRAP01903 254 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 WEE2P0C1S8 567 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 RSPH10BP0C881 870 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 KRT3P12035 628 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 COPB2P35606 906 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 RGS2P41220 211 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PTDSS1P48651 473 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 TPD52P55327 224 aaPredicted RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 INHBEP58166 350 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 MYL6P60660 151 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 NOP14P78316 857 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 GTF2BQ00403 316 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CYP24A1Q07973 514 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 LAMB3Q13751 1172 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PDK2Q15119 407 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CNGA3Q16281 694 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ZNF699Q32M78 642 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 EPC2Q52LR7 807 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 XKR3Q5GH77 459 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 EFHC1Q5JVL4 640 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PCNX4Q63HM2 1172 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CDC42EP5Q6NZY7 148 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 DNAJC14Q6Y2X3 702 aaPredicted RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 SPOCD1Q6ZMY3 1216 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ARCQ7LC44 396 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ARHGAP22Q7Z5H3 698 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 MTDHQ86UE4 582 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 LDHDQ86WU2 507 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 HACE1Q8IYU2 909 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 ABRAQ8N0Z2 381 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 CPXCR1Q8N123 301 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 SLC26A7Q8TE54 656 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 TRPC4APQ8TEL6 797 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 SLC20A1Q8WUM9 679 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PPP1R14BQ96C90 147 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 GPRASP2Q96D09 838 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 OXNAD1Q96HP4 312 aaPredicted RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 L3MBTL3Q96JM7 780 aaPredicted RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 TMEM120AQ9BXJ8 343 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 MRPL4Q9BYD3 311 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 NEUROG2Q9H2A3 272 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 SNX25Q9H3E2 840 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 GRHL1Q9NZI5 618 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 STX18Q9P2W9 335 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 ZC3H7BQ9UGR2 993 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 KIAA1257Q9ULG3 409 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.69□□□□□ -1.82
VMP1-216ENST00000592790 PCDHA2Q9Y5H9 948 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 RPTORQ8N122 1335 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 PIK3R2O00459 728 aa3.69□□□□□ -1.82
VMP1-216ENST00000592790 NOP56O00567 594 aaKnown RBP3.69□□□□□ -1.82
VMP1-216ENST00000592790 ALOX15BO15296 676 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms