RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 HMGA1P17096 107 aaKnown RBP20.28■□□□□ 0.84
CCDC43-205ENST00000592333 HOXA6P31267 233 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 SNRPFP62306 86 aaKnown RBP20.28■□□□□ 0.84
CCDC43-205ENST00000592333 MYO1EQ12965 1108 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 STK38Q15208 465 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 CFAP221Q4G0U5 840 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 CSGALNACT2Q8N6G5 542 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 SAAL1Q96ER3 474 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 TRMT2BQ96GJ1 504 aaKnown RBP20.28■□□□□ 0.84
CCDC43-205ENST00000592333 MYRFLQ96LU7 910 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 ZNF396Q96N95 335 aaPredicted RBP20.28■□□□□ 0.84
CCDC43-205ENST00000592333 LRRC3BQ96PB8 259 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 CBWD1Q9BRT8 395 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 SLC46A2Q9BY10 475 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 BACH2Q9BYV9 841 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 DDX43Q9NXZ2 648 aaKnown RBP20.28■□□□□ 0.84
CCDC43-205ENST00000592333 DLL3Q9NYJ7 618 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 L1RE1Q9UN81 338 aa20.28■□□□□ 0.84
CCDC43-205ENST00000592333 SMG5Q9UPR3 1016 aaKnown RBP20.28■□□□□ 0.84
CCDC43-205ENST00000592333 R3HCC1Q9Y3T6 440 aaKnown RBP20.28■□□□□ 0.84
CCDC43-205ENST00000592333 A0A087X0B3 334 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 ZNF233A6NK53 670 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 SPTLC2O15270 562 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 YEATS4O95619 227 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 F11P03951 625 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 PCSK1P29120 753 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 AVPR1AP37288 418 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 NLRP12P59046 1061 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 AMPD2Q01433 879 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 ZNF268Q14587 947 aaPredicted RBP20.27■□□□□ 0.84
CCDC43-205ENST00000592333 ITPRIPL2Q3MIP1 535 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 INTS6LQ5JSJ4 861 aaKnown RBP20.27■□□□□ 0.84
CCDC43-205ENST00000592333 TSSK4Q6SA08 328 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 RMDN1Q96DB5 314 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 ANKRD36BP1Q96IX9 119 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 INTS13Q9NVM9 706 aa20.27■□□□□ 0.84
CCDC43-205ENST00000592333 SLC38A8A6NNN8 435 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 PRR5-ARHGAP8B1AHC4 643 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 PRPF40AO75400 957 aaKnown RBP20.26■□□□□ 0.83
CCDC43-205ENST00000592333 FAM163BP0C2L3 166 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 TMEM191BP0C7N4 346 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 WNT7BP56706 349 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 ARHGAP8P85298 464 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 E2F4Q16254 413 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 LIMS2Q7Z4I7 341 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 TMEM150AQ86TG1 271 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 MON1AQ86VX9 555 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 IQUBQ8NA54 791 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 GIPC2Q8TF65 315 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 MRPS31Q92665 395 aaKnown RBP20.26■□□□□ 0.83
CCDC43-205ENST00000592333 PKMYT1Q99640 499 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 FAM83CQ9BQN1 747 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 PANK2Q9BZ23 570 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 TRIM9Q9C026 710 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 MAGEF1Q9HAY2 307 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 PDE11AQ9HCR9 933 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 TDP1Q9NUW8 608 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 GTSE1Q9NYZ3 720 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 DMXL1Q9Y485 3027 aa20.26■□□□□ 0.83
CCDC43-205ENST00000592333 LRP3O75074 770 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 NOL4O94818 638 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 PRPF6O94906 941 aaKnown RBP20.25■□□□□ 0.83
CCDC43-205ENST00000592333 PRAMEF12O95522 483 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 CYP4F8P98187 520 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 CCINQ13939 588 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 MAPRE1Q15691 268 aaKnown RBP20.25■□□□□ 0.83
CCDC43-205ENST00000592333 DUOXA2Q1HG44 320 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 LAIR1Q6GTX8 287 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 DCLK2Q8N568 766 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 PDILTQ8N807 584 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 ZSWIM2Q8NEG5 633 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 ZNF507Q8TCN5 953 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 EXOC4Q96A65 974 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 TMLHEQ9NVH6 421 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 SIX4Q9UIU6 781 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 GMEB2Q9UKD1 530 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 RAB23Q9ULC3 237 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 SNX9Q9Y5X1 595 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 GPR179Q6PRD1 2367 aa20.25■□□□□ 0.83
CCDC43-205ENST00000592333 CUTAO60888 179 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 TNNC2P02585 160 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 KRT19P08727 400 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 MAGEA11P43364 429 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 LMNB2Q03252 620 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 BFSP1Q12934 665 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 GAS6Q14393 721 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 FAM171BQ6P995 826 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 C4orf50Q6ZRC1 276 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 DGLUCYQ7Z3D6 616 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 WDR49Q8IV35 697 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 ADGRF2Q8IZF7 708 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 SNX21Q969T3 373 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 PI4K2AQ9BTU6 479 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 FGFBP2Q9BYJ0 223 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 PCIF1Q9H4Z3 704 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 UBE4BO95155 1302 aa20.24■□□□□ 0.83
CCDC43-205ENST00000592333 GOLGA8IPA6NC78 632 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 GOLGA8JA6NMD2 632 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 PFKLP17858 780 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 SATB1Q01826 763 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms